Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Clk3O35492 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Clk3O35492 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Clk3O35492 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Clk3O35492 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Clk3O35492 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.84■□□□□ 0.13
Clk3O35492 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Clk3O35492 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Clk3O35492 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.84■□□□□ 0.13
Clk3O35492 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Clk3O35492 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Clk3O35492 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Clk3O35492 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Clk3O35492 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Clk3O35492 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Clk3O35492 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Clk3O35492 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Clk3O35492 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Clk3O35492 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Clk3O35492 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Clk3O35492 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.83■□□□□ 0.13
Clk3O35492 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Clk3O35492 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
Clk3O35492 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Clk3O35492 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.83■□□□□ 0.12
Clk3O35492 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Clk3O35492 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.83■□□□□ 0.12
Clk3O35492 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Clk3O35492 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.83■□□□□ 0.12
Clk3O35492 Gm24841-201ENSMUST00000158676 357 ntBASIC15.83■□□□□ 0.12
Clk3O35492 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
Clk3O35492 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Clk3O35492 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.83■□□□□ 0.12
Clk3O35492 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.83■□□□□ 0.12
Clk3O35492 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.83■□□□□ 0.12
Clk3O35492 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.83■□□□□ 0.12
Clk3O35492 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Clk3O35492 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Clk3O35492 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Clk3O35492 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Clk3O35492 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Clk3O35492 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.12
Clk3O35492 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Clk3O35492 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Clk3O35492 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Clk3O35492 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clk3O35492 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.82■□□□□ 0.12
Clk3O35492 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clk3O35492 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clk3O35492 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clk3O35492 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clk3O35492 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clk3O35492 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clk3O35492 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Clk3O35492 Gm12085-201ENSMUST00000119263 940 ntBASIC15.82■□□□□ 0.12
Clk3O35492 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clk3O35492 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Clk3O35492 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clk3O35492 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clk3O35492 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clk3O35492 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clk3O35492 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.82■□□□□ 0.12
Clk3O35492 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clk3O35492 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clk3O35492 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clk3O35492 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clk3O35492 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Clk3O35492 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clk3O35492 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Clk3O35492 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Clk3O35492 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Clk3O35492 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clk3O35492 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Clk3O35492 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clk3O35492 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.81■□□□□ 0.12
Clk3O35492 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clk3O35492 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clk3O35492 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Clk3O35492 Gm37025-201ENSMUST00000195159 829 ntBASIC15.81■□□□□ 0.12
Clk3O35492 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clk3O35492 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clk3O35492 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clk3O35492 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clk3O35492 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clk3O35492 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.81■□□□□ 0.12
Clk3O35492 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.81■□□□□ 0.12
Clk3O35492 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Clk3O35492 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Clk3O35492 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clk3O35492 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clk3O35492 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Clk3O35492 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clk3O35492 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clk3O35492 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.8■□□□□ 0.12
Clk3O35492 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clk3O35492 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clk3O35492 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clk3O35492 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clk3O35492 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.8■□□□□ 0.12
Clk3O35492 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms