Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clk2O35491 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Clk2O35491 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clk2O35491 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clk2O35491 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Clk2O35491 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clk2O35491 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clk2O35491 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clk2O35491 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clk2O35491 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
Clk2O35491 Gm7153-201ENSMUST00000117092 455 ntBASIC18.06■□□□□ 0.48
Clk2O35491 Gm13312-201ENSMUST00000119631 718 ntBASIC18.06■□□□□ 0.48
Clk2O35491 Gm12895-201ENSMUST00000122214 226 ntBASIC18.06■□□□□ 0.48
Clk2O35491 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Clk2O35491 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clk2O35491 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clk2O35491 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Clk2O35491 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clk2O35491 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clk2O35491 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clk2O35491 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Clk2O35491 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.06■□□□□ 0.48
Clk2O35491 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clk2O35491 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Clk2O35491 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.06■□□□□ 0.48
Clk2O35491 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.06■□□□□ 0.48
Clk2O35491 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clk2O35491 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Clk2O35491 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clk2O35491 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Clk2O35491 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clk2O35491 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Clk2O35491 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.05■□□□□ 0.48
Clk2O35491 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clk2O35491 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Clk2O35491 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clk2O35491 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Clk2O35491 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.05■□□□□ 0.48
Clk2O35491 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Clk2O35491 Gm34391-201ENSMUST00000203706 907 ntBASIC18.05■□□□□ 0.48
Clk2O35491 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Clk2O35491 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Clk2O35491 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clk2O35491 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Clk2O35491 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.05■□□□□ 0.48
Clk2O35491 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Clk2O35491 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Clk2O35491 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Clk2O35491 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clk2O35491 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clk2O35491 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Clk2O35491 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Clk2O35491 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Clk2O35491 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clk2O35491 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Clk2O35491 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Clk2O35491 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clk2O35491 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clk2O35491 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clk2O35491 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clk2O35491 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clk2O35491 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clk2O35491 Gm15372-201ENSMUST00000120729 834 ntBASIC18.04■□□□□ 0.48
Clk2O35491 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clk2O35491 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC18.04■□□□□ 0.48
Clk2O35491 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.04■□□□□ 0.48
Clk2O35491 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Clk2O35491 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Clk2O35491 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Clk2O35491 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clk2O35491 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clk2O35491 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Clk2O35491 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clk2O35491 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Clk2O35491 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Clk2O35491 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Clk2O35491 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Clk2O35491 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Clk2O35491 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Clk2O35491 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clk2O35491 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Clk2O35491 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clk2O35491 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clk2O35491 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clk2O35491 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Clk2O35491 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clk2O35491 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clk2O35491 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clk2O35491 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.03■□□□□ 0.48
Clk2O35491 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Clk2O35491 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Clk2O35491 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Clk2O35491 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.02■□□□□ 0.48
Clk2O35491 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.02■□□□□ 0.48
Clk2O35491 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
Clk2O35491 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.02■□□□□ 0.48
Clk2O35491 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18.02■□□□□ 0.48
Clk2O35491 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Clk2O35491 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Clk2O35491 Birc2-201ENSMUST00000054878 378 ntBASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms