Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Tnfsf11O35235 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Tnfsf11O35235 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Tnfsf11O35235 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfsf11O35235 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfsf11O35235 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfsf11O35235 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfsf11O35235 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfsf11O35235 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfsf11O35235 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tnfsf11O35235 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tnfsf11O35235 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Tnfsf11O35235 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.02□□□□□ -0.32
Tnfsf11O35235 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.02□□□□□ -0.32
Tnfsf11O35235 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC13.02□□□□□ -0.32
Tnfsf11O35235 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tnfsf11O35235 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tnfsf11O35235 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tnfsf11O35235 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tnfsf11O35235 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tnfsf11O35235 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Tnfsf11O35235 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Tnfsf11O35235 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfsf11O35235 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfsf11O35235 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC13.02□□□□□ -0.33
Tnfsf11O35235 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Tnfsf11O35235 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfsf11O35235 Gm11643-201ENSMUST00000119578 864 ntBASIC13.02□□□□□ -0.33
Tnfsf11O35235 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Tnfsf11O35235 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC13.02□□□□□ -0.33
Tnfsf11O35235 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC13.02□□□□□ -0.33
Tnfsf11O35235 Gm7291-201ENSMUST00000199147 382 ntBASIC13.02□□□□□ -0.33
Tnfsf11O35235 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC13.02□□□□□ -0.33
Tnfsf11O35235 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfsf11O35235 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfsf11O35235 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC13.02□□□□□ -0.33
Tnfsf11O35235 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfsf11O35235 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfsf11O35235 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfsf11O35235 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfsf11O35235 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfsf11O35235 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfsf11O35235 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfsf11O35235 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfsf11O35235 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Tnfsf11O35235 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfsf11O35235 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfsf11O35235 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Tnfsf11O35235 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Tnfsf11O35235 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfsf11O35235 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfsf11O35235 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfsf11O35235 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfsf11O35235 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfsf11O35235 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfsf11O35235 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfsf11O35235 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfsf11O35235 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfsf11O35235 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfsf11O35235 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC13.01□□□□□ -0.33
Tnfsf11O35235 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Tnfsf11O35235 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfsf11O35235 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Tnfsf11O35235 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfsf11O35235 Gm44549-201ENSMUST00000208351 577 ntBASIC13.01□□□□□ -0.33
Tnfsf11O35235 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC13.01□□□□□ -0.33
Tnfsf11O35235 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Tnfsf11O35235 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfsf11O35235 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Tnfsf11O35235 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Tnfsf11O35235 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfsf11O35235 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfsf11O35235 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Tnfsf11O35235 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfsf11O35235 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfsf11O35235 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfsf11O35235 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfsf11O35235 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfsf11O35235 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfsf11O35235 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tnfsf11O35235 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfsf11O35235 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tnfsf11O35235 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13□□□□□ -0.33
Tnfsf11O35235 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfsf11O35235 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tnfsf11O35235 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tnfsf11O35235 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfsf11O35235 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfsf11O35235 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tnfsf11O35235 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Tnfsf11O35235 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC13□□□□□ -0.33
Tnfsf11O35235 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC13□□□□□ -0.33
Tnfsf11O35235 Gm6365-201ENSMUST00000054711 744 ntBASIC13□□□□□ -0.33
Tnfsf11O35235 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Tnfsf11O35235 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfsf11O35235 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfsf11O35235 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfsf11O35235 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfsf11O35235 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfsf11O35235 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms