Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC21.29■■□□□ 1
Col15a1O35206 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Col15a1O35206 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Col15a1O35206 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
Col15a1O35206 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Col15a1O35206 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Col15a1O35206 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC21.28■■□□□ 1
Col15a1O35206 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC21.28■■□□□ 1
Col15a1O35206 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Col15a1O35206 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Col15a1O35206 Gm6550-201ENSMUST00000187574 993 ntBASIC21.28■■□□□ 1
Col15a1O35206 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC21.28■■□□□ 1
Col15a1O35206 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC21.28■■□□□ 1
Col15a1O35206 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Col15a1O35206 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Col15a1O35206 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col15a1O35206 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col15a1O35206 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col15a1O35206 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Col15a1O35206 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Col15a1O35206 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC21.28■■□□□ 1
Col15a1O35206 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col15a1O35206 Gm11620-201ENSMUST00000118770 1845 ntBASIC21.27■■□□□ 1
Col15a1O35206 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Col15a1O35206 Gm27628-201ENSMUST00000184911 107 ntBASIC21.27■■□□□ 1
Col15a1O35206 Gm36967-201ENSMUST00000193814 266 ntBASIC21.27■■□□□ 1
Col15a1O35206 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC21.27■■□□□ 1
Col15a1O35206 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Col15a1O35206 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Col15a1O35206 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Col15a1O35206 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Col15a1O35206 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col15a1O35206 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col15a1O35206 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Col15a1O35206 Gm13036-201ENSMUST00000117799 748 ntBASIC21.26■□□□□ 0.99
Col15a1O35206 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC21.26■□□□□ 0.99
Col15a1O35206 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Col15a1O35206 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col15a1O35206 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Col15a1O35206 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col15a1O35206 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Col15a1O35206 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col15a1O35206 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Col15a1O35206 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Col15a1O35206 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Col15a1O35206 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col15a1O35206 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC21.25■□□□□ 0.99
Col15a1O35206 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col15a1O35206 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Col15a1O35206 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Col15a1O35206 Gm27702-201ENSMUST00000184512 56 ntBASIC21.25■□□□□ 0.99
Col15a1O35206 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Col15a1O35206 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Col15a1O35206 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col15a1O35206 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col15a1O35206 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col15a1O35206 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col15a1O35206 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Col15a1O35206 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col15a1O35206 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Col15a1O35206 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col15a1O35206 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col15a1O35206 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col15a1O35206 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Col15a1O35206 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Col15a1O35206 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Col15a1O35206 Gm14494-201ENSMUST00000118786 435 ntBASIC21.24■□□□□ 0.99
Col15a1O35206 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Col15a1O35206 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col15a1O35206 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col15a1O35206 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col15a1O35206 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Col15a1O35206 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Col15a1O35206 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col15a1O35206 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC21.23■□□□□ 0.99
Col15a1O35206 Gm14140-201ENSMUST00000119999 995 ntBASIC21.23■□□□□ 0.99
Col15a1O35206 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC21.23■□□□□ 0.99
Col15a1O35206 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col15a1O35206 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC21.23■□□□□ 0.99
Col15a1O35206 CT943659.1-201ENSMUST00000215459 326 ntBASIC21.23■□□□□ 0.99
Col15a1O35206 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC21.23■□□□□ 0.99
Col15a1O35206 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col15a1O35206 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Col15a1O35206 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC21.23■□□□□ 0.99
Col15a1O35206 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC21.23■□□□□ 0.99
Col15a1O35206 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col15a1O35206 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Col15a1O35206 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC21.23■□□□□ 0.99
Col15a1O35206 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col15a1O35206 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col15a1O35206 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC21.23■□□□□ 0.99
Col15a1O35206 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col15a1O35206 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col15a1O35206 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Col15a1O35206 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col15a1O35206 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Col15a1O35206 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Col15a1O35206 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Col15a1O35206 Gm43575-201ENSMUST00000196420 516 ntBASIC21.23■□□□□ 0.99
Col15a1O35206 Gm43935-201ENSMUST00000203569 1050 ntBASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms