Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Gm26039-201ENSMUST00000158152 144 ntBASIC15.63■□□□□ 0.09
Cx3cl1O35188 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cx3cl1O35188 Gm7977-201ENSMUST00000193787 748 ntBASIC15.63■□□□□ 0.09
Cx3cl1O35188 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Cx3cl1O35188 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cx3cl1O35188 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cx3cl1O35188 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cx3cl1O35188 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Cx3cl1O35188 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cx3cl1O35188 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cx3cl1O35188 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cx3cl1O35188 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cx3cl1O35188 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cx3cl1O35188 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cx3cl1O35188 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Cx3cl1O35188 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cx3cl1O35188 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cx3cl1O35188 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cx3cl1O35188 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cx3cl1O35188 Gm6659-201ENSMUST00000174752 547 ntBASIC15.62■□□□□ 0.09
Cx3cl1O35188 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cx3cl1O35188 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cx3cl1O35188 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cx3cl1O35188 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
Cx3cl1O35188 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cx3cl1O35188 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cx3cl1O35188 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.62■□□□□ 0.09
Cx3cl1O35188 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cx3cl1O35188 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cx3cl1O35188 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cx3cl1O35188 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Cx3cl1O35188 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cx3cl1O35188 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cx3cl1O35188 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cx3cl1O35188 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cx3cl1O35188 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cx3cl1O35188 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cx3cl1O35188 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Cx3cl1O35188 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Cx3cl1O35188 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cx3cl1O35188 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.61■□□□□ 0.09
Cx3cl1O35188 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cx3cl1O35188 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Cx3cl1O35188 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cx3cl1O35188 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cx3cl1O35188 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cx3cl1O35188 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cx3cl1O35188 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.61■□□□□ 0.09
Cx3cl1O35188 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.61■□□□□ 0.09
Cx3cl1O35188 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cx3cl1O35188 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cx3cl1O35188 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.61■□□□□ 0.09
Cx3cl1O35188 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.61■□□□□ 0.09
Cx3cl1O35188 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Cx3cl1O35188 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cx3cl1O35188 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cx3cl1O35188 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cx3cl1O35188 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cx3cl1O35188 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cx3cl1O35188 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cx3cl1O35188 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cx3cl1O35188 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cx3cl1O35188 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
Cx3cl1O35188 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Cx3cl1O35188 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cx3cl1O35188 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cx3cl1O35188 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.6■□□□□ 0.09
Cx3cl1O35188 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cx3cl1O35188 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cx3cl1O35188 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cx3cl1O35188 Gm13186-201ENSMUST00000118031 316 ntBASIC15.6■□□□□ 0.09
Cx3cl1O35188 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cx3cl1O35188 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Cx3cl1O35188 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cx3cl1O35188 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cx3cl1O35188 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.6■□□□□ 0.09
Cx3cl1O35188 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cx3cl1O35188 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Cx3cl1O35188 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cx3cl1O35188 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cx3cl1O35188 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cx3cl1O35188 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cx3cl1O35188 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cx3cl1O35188 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cx3cl1O35188 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cx3cl1O35188 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.59■□□□□ 0.09
Cx3cl1O35188 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cx3cl1O35188 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cx3cl1O35188 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cx3cl1O35188 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cx3cl1O35188 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.59■□□□□ 0.09
Cx3cl1O35188 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cx3cl1O35188 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cx3cl1O35188 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cx3cl1O35188 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cx3cl1O35188 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Cx3cl1O35188 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cx3cl1O35188 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
Cx3cl1O35188 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Cx3cl1O35188 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms