Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ercc2O08811 Gm44450-201ENSMUST00000199528 114 ntBASIC17.03■□□□□ 0.32
Ercc2O08811 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.03■□□□□ 0.32
Ercc2O08811 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ercc2O08811 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ercc2O08811 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.03■□□□□ 0.32
Ercc2O08811 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ercc2O08811 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ercc2O08811 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ercc2O08811 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ercc2O08811 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ercc2O08811 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ercc2O08811 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ercc2O08811 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ercc2O08811 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ercc2O08811 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ercc2O08811 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ercc2O08811 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ercc2O08811 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ercc2O08811 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Ercc2O08811 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ercc2O08811 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ercc2O08811 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ercc2O08811 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ercc2O08811 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ercc2O08811 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Ercc2O08811 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Ercc2O08811 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.02■□□□□ 0.32
Ercc2O08811 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ercc2O08811 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.02■□□□□ 0.32
Ercc2O08811 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Ercc2O08811 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Ercc2O08811 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ercc2O08811 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Ercc2O08811 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ercc2O08811 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ercc2O08811 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.02■□□□□ 0.31
Ercc2O08811 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.02■□□□□ 0.31
Ercc2O08811 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ercc2O08811 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ercc2O08811 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Ercc2O08811 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ercc2O08811 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ercc2O08811 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ercc2O08811 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ercc2O08811 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ercc2O08811 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ercc2O08811 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Ercc2O08811 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.01■□□□□ 0.31
Ercc2O08811 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ercc2O08811 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ercc2O08811 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ercc2O08811 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ercc2O08811 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.01■□□□□ 0.31
Ercc2O08811 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ercc2O08811 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ercc2O08811 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ercc2O08811 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ercc2O08811 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Ercc2O08811 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ercc2O08811 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Ercc2O08811 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ercc2O08811 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ercc2O08811 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ercc2O08811 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ercc2O08811 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ercc2O08811 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Ercc2O08811 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ercc2O08811 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ercc2O08811 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ercc2O08811 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ercc2O08811 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ercc2O08811 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Ercc2O08811 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ercc2O08811 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ercc2O08811 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Ercc2O08811 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ercc2O08811 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ercc2O08811 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Ercc2O08811 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ercc2O08811 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ercc2O08811 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17■□□□□ 0.31
Ercc2O08811 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Ercc2O08811 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ercc2O08811 Zfp264-201ENSMUST00000208656 1563 ntBASIC17■□□□□ 0.31
Ercc2O08811 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Ercc2O08811 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ercc2O08811 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ercc2O08811 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ercc2O08811 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Ercc2O08811 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ercc2O08811 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ercc2O08811 Gm10013-201ENSMUST00000106074 672 ntBASIC16.99■□□□□ 0.31
Ercc2O08811 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ercc2O08811 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.99■□□□□ 0.31
Ercc2O08811 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ercc2O08811 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.99■□□□□ 0.31
Ercc2O08811 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
Ercc2O08811 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ercc2O08811 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms