Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Trim34bJ3QNR8 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim34bJ3QNR8 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim34bJ3QNR8 Mir8098-201ENSMUST00000184011 137 ntBASIC20.33■□□□□ 0.85
Trim34bJ3QNR8 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC20.33■□□□□ 0.85
Trim34bJ3QNR8 Gm5864-201ENSMUST00000202263 970 ntBASIC20.33■□□□□ 0.85
Trim34bJ3QNR8 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Trim34bJ3QNR8 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC20.33■□□□□ 0.85
Trim34bJ3QNR8 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Trim34bJ3QNR8 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Trim34bJ3QNR8 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trim34bJ3QNR8 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Trim34bJ3QNR8 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trim34bJ3QNR8 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trim34bJ3QNR8 Gm15442-201ENSMUST00000117905 1527 ntBASIC20.32■□□□□ 0.84
Trim34bJ3QNR8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Trim34bJ3QNR8 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Trim34bJ3QNR8 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim34bJ3QNR8 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trim34bJ3QNR8 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim34bJ3QNR8 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim34bJ3QNR8 Gm12644-201ENSMUST00000119935 606 ntBASIC20.32■□□□□ 0.84
Trim34bJ3QNR8 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC20.32■□□□□ 0.84
Trim34bJ3QNR8 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC20.32■□□□□ 0.84
Trim34bJ3QNR8 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim34bJ3QNR8 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim34bJ3QNR8 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trim34bJ3QNR8 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim34bJ3QNR8 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim34bJ3QNR8 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim34bJ3QNR8 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim34bJ3QNR8 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim34bJ3QNR8 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Trim34bJ3QNR8 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim34bJ3QNR8 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim34bJ3QNR8 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim34bJ3QNR8 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim34bJ3QNR8 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim34bJ3QNR8 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trim34bJ3QNR8 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim34bJ3QNR8 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim34bJ3QNR8 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim34bJ3QNR8 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim34bJ3QNR8 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Trim34bJ3QNR8 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim34bJ3QNR8 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim34bJ3QNR8 Gm44771-201ENSMUST00000206975 626 ntBASIC20.3■□□□□ 0.84
Trim34bJ3QNR8 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim34bJ3QNR8 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim34bJ3QNR8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim34bJ3QNR8 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim34bJ3QNR8 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim34bJ3QNR8 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim34bJ3QNR8 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim34bJ3QNR8 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim34bJ3QNR8 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim34bJ3QNR8 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim34bJ3QNR8 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim34bJ3QNR8 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim34bJ3QNR8 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim34bJ3QNR8 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim34bJ3QNR8 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim34bJ3QNR8 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC20.29■□□□□ 0.84
Trim34bJ3QNR8 Gm13884-201ENSMUST00000118103 829 ntBASIC20.29■□□□□ 0.84
Trim34bJ3QNR8 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC20.29■□□□□ 0.84
Trim34bJ3QNR8 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim34bJ3QNR8 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC20.29■□□□□ 0.84
Trim34bJ3QNR8 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim34bJ3QNR8 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim34bJ3QNR8 Gm11620-201ENSMUST00000118770 1845 ntBASIC20.29■□□□□ 0.84
Trim34bJ3QNR8 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.29■□□□□ 0.84
Trim34bJ3QNR8 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim34bJ3QNR8 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim34bJ3QNR8 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim34bJ3QNR8 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim34bJ3QNR8 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim34bJ3QNR8 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim34bJ3QNR8 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim34bJ3QNR8 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim34bJ3QNR8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim34bJ3QNR8 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Trim34bJ3QNR8 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim34bJ3QNR8 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.28■□□□□ 0.84
Trim34bJ3QNR8 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
Trim34bJ3QNR8 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim34bJ3QNR8 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
Trim34bJ3QNR8 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Trim34bJ3QNR8 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim34bJ3QNR8 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim34bJ3QNR8 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim34bJ3QNR8 AC159301.1-201ENSMUST00000225130 1182 ntBASIC20.28■□□□□ 0.84
Trim34bJ3QNR8 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Trim34bJ3QNR8 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim34bJ3QNR8 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim34bJ3QNR8 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim34bJ3QNR8 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim34bJ3QNR8 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Trim34bJ3QNR8 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim34bJ3QNR8 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim34bJ3QNR8 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms