Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Ccdc180J3QNE4 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Ccdc180J3QNE4 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Ccdc180J3QNE4 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Ccdc180J3QNE4 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Ccdc180J3QNE4 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC30.21■■■□□ 2.43
Ccdc180J3QNE4 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC30.21■■■□□ 2.43
Ccdc180J3QNE4 Gm43332-201ENSMUST00000202511 1044 ntBASIC30.2■■■□□ 2.43
Ccdc180J3QNE4 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Ccdc180J3QNE4 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC30.2■■■□□ 2.42
Ccdc180J3QNE4 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC30.2■■■□□ 2.42
Ccdc180J3QNE4 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
Ccdc180J3QNE4 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC30.2■■■□□ 2.42
Ccdc180J3QNE4 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.42
Ccdc180J3QNE4 AC131586.3-201ENSMUST00000228355 1367 ntBASIC30.2■■■□□ 2.42
Ccdc180J3QNE4 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.42
Ccdc180J3QNE4 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Ccdc180J3QNE4 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Ccdc180J3QNE4 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
Ccdc180J3QNE4 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Ccdc180J3QNE4 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC30.19■■■□□ 2.42
Ccdc180J3QNE4 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC30.19■■■□□ 2.42
Ccdc180J3QNE4 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
Ccdc180J3QNE4 Gm6858-201ENSMUST00000208582 1468 ntBASIC30.19■■■□□ 2.42
Ccdc180J3QNE4 Gm37194-201ENSMUST00000193092 3031 ntBASIC30.19■■■□□ 2.42
Ccdc180J3QNE4 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
Ccdc180J3QNE4 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Ccdc180J3QNE4 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Ccdc180J3QNE4 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC30.18■■■□□ 2.42
Ccdc180J3QNE4 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Ccdc180J3QNE4 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
Ccdc180J3QNE4 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC30.18■■■□□ 2.42
Ccdc180J3QNE4 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
Ccdc180J3QNE4 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC30.18■■■□□ 2.42
Ccdc180J3QNE4 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC30.18■■■□□ 2.42
Ccdc180J3QNE4 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC30.18■■■□□ 2.42
Ccdc180J3QNE4 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC30.18■■■□□ 2.42
Ccdc180J3QNE4 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC30.18■■■□□ 2.42
Ccdc180J3QNE4 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
Ccdc180J3QNE4 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Ccdc180J3QNE4 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Ccdc180J3QNE4 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Ccdc180J3QNE4 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC30.18■■■□□ 2.42
Ccdc180J3QNE4 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Ccdc180J3QNE4 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC30.17■■■□□ 2.42
Ccdc180J3QNE4 Mir6404-201ENSMUST00000183699 94 ntBASIC30.17■■■□□ 2.42
Ccdc180J3QNE4 Gm27702-201ENSMUST00000184512 56 ntBASIC30.17■■■□□ 2.42
Ccdc180J3QNE4 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC30.17■■■□□ 2.42
Ccdc180J3QNE4 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC30.17■■■□□ 2.42
Ccdc180J3QNE4 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC30.17■■■□□ 2.42
Ccdc180J3QNE4 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Ccdc180J3QNE4 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Ccdc180J3QNE4 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC30.17■■■□□ 2.42
Ccdc180J3QNE4 Gm5264-201ENSMUST00000190584 848 ntBASIC30.17■■■□□ 2.42
Ccdc180J3QNE4 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Ccdc180J3QNE4 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC30.17■■■□□ 2.42
Ccdc180J3QNE4 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Ccdc180J3QNE4 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Ccdc180J3QNE4 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Ccdc180J3QNE4 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Ccdc180J3QNE4 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Ccdc180J3QNE4 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
Ccdc180J3QNE4 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Ccdc180J3QNE4 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Ccdc180J3QNE4 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Ccdc180J3QNE4 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Ccdc180J3QNE4 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Ccdc180J3QNE4 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Ccdc180J3QNE4 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Ccdc180J3QNE4 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Ccdc180J3QNE4 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC30.15■■■□□ 2.42
Ccdc180J3QNE4 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Ccdc180J3QNE4 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC30.15■■■□□ 2.42
Ccdc180J3QNE4 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Ccdc180J3QNE4 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC30.15■■■□□ 2.42
Ccdc180J3QNE4 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Ccdc180J3QNE4 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC30.14■■■□□ 2.42
Ccdc180J3QNE4 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Ccdc180J3QNE4 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC30.14■■■□□ 2.42
Ccdc180J3QNE4 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.42
Ccdc180J3QNE4 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
Ccdc180J3QNE4 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC30.14■■■□□ 2.41
Ccdc180J3QNE4 Gm11594-201ENSMUST00000122313 162 ntBASIC30.14■■■□□ 2.41
Ccdc180J3QNE4 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC30.14■■■□□ 2.41
Ccdc180J3QNE4 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC30.14■■■□□ 2.41
Ccdc180J3QNE4 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
Ccdc180J3QNE4 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC30.14■■■□□ 2.41
Ccdc180J3QNE4 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC30.14■■■□□ 2.41
Ccdc180J3QNE4 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC30.14■■■□□ 2.41
Ccdc180J3QNE4 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
Ccdc180J3QNE4 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
Ccdc180J3QNE4 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Ccdc180J3QNE4 Gm25911-201ENSMUST00000157621 56 ntBASIC30.13■■■□□ 2.41
Ccdc180J3QNE4 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC30.13■■■□□ 2.41
Ccdc180J3QNE4 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
Ccdc180J3QNE4 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Ccdc180J3QNE4 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Ccdc180J3QNE4 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC30.12■■■□□ 2.41
Ccdc180J3QNE4 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
Ccdc180J3QNE4 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC30.12■■■□□ 2.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms