Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Pcf11G3X9Z4 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Pcf11G3X9Z4 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Pcf11G3X9Z4 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC25.12■■□□□ 1.61
Pcf11G3X9Z4 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Pcf11G3X9Z4 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Pcf11G3X9Z4 Gm4995-201ENSMUST00000117247 432 ntBASIC25.12■■□□□ 1.61
Pcf11G3X9Z4 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Pcf11G3X9Z4 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
Pcf11G3X9Z4 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC25.12■■□□□ 1.61
Pcf11G3X9Z4 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Pcf11G3X9Z4 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC25.12■■□□□ 1.61
Pcf11G3X9Z4 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC25.12■■□□□ 1.61
Pcf11G3X9Z4 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
Pcf11G3X9Z4 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Pcf11G3X9Z4 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Pcf11G3X9Z4 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Pcf11G3X9Z4 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Pcf11G3X9Z4 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
Pcf11G3X9Z4 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Pcf11G3X9Z4 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Pcf11G3X9Z4 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Pcf11G3X9Z4 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
Pcf11G3X9Z4 Gm11780-201ENSMUST00000136880 516 ntBASIC25.11■■□□□ 1.61
Pcf11G3X9Z4 Mir6404-201ENSMUST00000183699 94 ntBASIC25.11■■□□□ 1.61
Pcf11G3X9Z4 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC25.11■■□□□ 1.61
Pcf11G3X9Z4 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Pcf11G3X9Z4 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Pcf11G3X9Z4 Gm18856-201ENSMUST00000178096 1374 ntBASIC25.11■■□□□ 1.61
Pcf11G3X9Z4 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Pcf11G3X9Z4 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Pcf11G3X9Z4 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Pcf11G3X9Z4 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
Pcf11G3X9Z4 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Pcf11G3X9Z4 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Pcf11G3X9Z4 Gm6550-201ENSMUST00000187574 993 ntBASIC25.1■■□□□ 1.61
Pcf11G3X9Z4 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC25.1■■□□□ 1.61
Pcf11G3X9Z4 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC25.1■■□□□ 1.61
Pcf11G3X9Z4 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Pcf11G3X9Z4 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Pcf11G3X9Z4 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Pcf11G3X9Z4 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
Pcf11G3X9Z4 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Pcf11G3X9Z4 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC25.1■■□□□ 1.61
Pcf11G3X9Z4 Gm1401-201ENSMUST00000122048 772 ntBASIC25.1■■□□□ 1.61
Pcf11G3X9Z4 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC25.1■■□□□ 1.61
Pcf11G3X9Z4 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC25.1■■□□□ 1.61
Pcf11G3X9Z4 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC25.1■■□□□ 1.61
Pcf11G3X9Z4 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
Pcf11G3X9Z4 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Pcf11G3X9Z4 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
Pcf11G3X9Z4 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Pcf11G3X9Z4 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Pcf11G3X9Z4 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Pcf11G3X9Z4 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC25.09■■□□□ 1.61
Pcf11G3X9Z4 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Pcf11G3X9Z4 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC25.09■■□□□ 1.61
Pcf11G3X9Z4 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC25.09■■□□□ 1.61
Pcf11G3X9Z4 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC25.09■■□□□ 1.61
Pcf11G3X9Z4 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Pcf11G3X9Z4 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC25.09■■□□□ 1.61
Pcf11G3X9Z4 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Pcf11G3X9Z4 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC25.09■■□□□ 1.61
Pcf11G3X9Z4 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
Pcf11G3X9Z4 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Pcf11G3X9Z4 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC25.08■■□□□ 1.61
Pcf11G3X9Z4 Gm43702-201ENSMUST00000198772 2546 ntBASIC25.08■■□□□ 1.61
Pcf11G3X9Z4 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Pcf11G3X9Z4 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Pcf11G3X9Z4 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC25.08■■□□□ 1.61
Pcf11G3X9Z4 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Pcf11G3X9Z4 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC25.08■■□□□ 1.61
Pcf11G3X9Z4 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC25.08■■□□□ 1.61
Pcf11G3X9Z4 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Pcf11G3X9Z4 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pcf11G3X9Z4 Gm11779-201ENSMUST00000118541 368 ntBASIC25.07■■□□□ 1.6
Pcf11G3X9Z4 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pcf11G3X9Z4 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC25.07■■□□□ 1.6
Pcf11G3X9Z4 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pcf11G3X9Z4 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
Pcf11G3X9Z4 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pcf11G3X9Z4 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pcf11G3X9Z4 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pcf11G3X9Z4 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC25.07■■□□□ 1.6
Pcf11G3X9Z4 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pcf11G3X9Z4 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Pcf11G3X9Z4 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Pcf11G3X9Z4 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC25.06■■□□□ 1.6
Pcf11G3X9Z4 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Pcf11G3X9Z4 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC25.06■■□□□ 1.6
Pcf11G3X9Z4 Gm9172-201ENSMUST00000212092 954 ntBASIC25.06■■□□□ 1.6
Pcf11G3X9Z4 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Pcf11G3X9Z4 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Pcf11G3X9Z4 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Pcf11G3X9Z4 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC25.06■■□□□ 1.6
Pcf11G3X9Z4 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Pcf11G3X9Z4 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
Pcf11G3X9Z4 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Pcf11G3X9Z4 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Pcf11G3X9Z4 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms