Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm37025-201ENSMUST00000195159 829 ntBASIC15□□□□□ -0.01
Pcdh1F7BJK1 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh1F7BJK1 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdh1F7BJK1 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh1F7BJK1 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh1F7BJK1 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh1F7BJK1 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh1F7BJK1 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh1F7BJK1 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh1F7BJK1 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh1F7BJK1 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15□□□□□ -0.01
Pcdh1F7BJK1 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh1F7BJK1 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh1F7BJK1 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh1F7BJK1 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh1F7BJK1 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh1F7BJK1 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC14.99□□□□□ -0.01
Pcdh1F7BJK1 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh1F7BJK1 Gm20049-201ENSMUST00000219950 730 ntBASIC14.99□□□□□ -0.01
Pcdh1F7BJK1 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh1F7BJK1 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Pcdh1F7BJK1 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Pcdh1F7BJK1 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh1F7BJK1 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh1F7BJK1 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh1F7BJK1 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh1F7BJK1 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Pcdh1F7BJK1 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh1F7BJK1 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh1F7BJK1 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh1F7BJK1 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh1F7BJK1 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Pcdh1F7BJK1 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh1F7BJK1 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh1F7BJK1 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh1F7BJK1 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh1F7BJK1 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh1F7BJK1 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh1F7BJK1 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh1F7BJK1 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh1F7BJK1 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh1F7BJK1 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh1F7BJK1 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh1F7BJK1 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh1F7BJK1 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC14.98□□□□□ -0.01
Pcdh1F7BJK1 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.98□□□□□ -0.01
Pcdh1F7BJK1 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.98□□□□□ -0.01
Pcdh1F7BJK1 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh1F7BJK1 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
Pcdh1F7BJK1 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh1F7BJK1 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh1F7BJK1 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh1F7BJK1 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh1F7BJK1 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Pcdh1F7BJK1 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh1F7BJK1 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh1F7BJK1 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh1F7BJK1 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh1F7BJK1 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh1F7BJK1 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh1F7BJK1 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.97□□□□□ -0.01
Pcdh1F7BJK1 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh1F7BJK1 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh1F7BJK1 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh1F7BJK1 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.97□□□□□ -0.01
Pcdh1F7BJK1 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh1F7BJK1 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh1F7BJK1 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh1F7BJK1 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh1F7BJK1 Gm27275-201ENSMUST00000184318 272 ntBASIC14.97□□□□□ -0.01
Pcdh1F7BJK1 Gm29257-201ENSMUST00000186115 639 ntBASIC14.97□□□□□ -0.01
Pcdh1F7BJK1 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.97□□□□□ -0.01
Pcdh1F7BJK1 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh1F7BJK1 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh1F7BJK1 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh1F7BJK1 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh1F7BJK1 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh1F7BJK1 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh1F7BJK1 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh1F7BJK1 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh1F7BJK1 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh1F7BJK1 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh1F7BJK1 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Pcdh1F7BJK1 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh1F7BJK1 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.97□□□□□ -0.01
Pcdh1F7BJK1 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh1F7BJK1 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.96□□□□□ -0.01
Pcdh1F7BJK1 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh1F7BJK1 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh1F7BJK1 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh1F7BJK1 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh1F7BJK1 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh1F7BJK1 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh1F7BJK1 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.96□□□□□ -0.01
Pcdh1F7BJK1 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh1F7BJK1 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh1F7BJK1 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
Pcdh1F7BJK1 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh1F7BJK1 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh1F7BJK1 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 604.6 ms