Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
Ube4aE9Q735 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ube4aE9Q735 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Ube4aE9Q735 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ube4aE9Q735 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Ube4aE9Q735 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC19.94■□□□□ 0.78
Ube4aE9Q735 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Ube4aE9Q735 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ube4aE9Q735 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Ube4aE9Q735 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ube4aE9Q735 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
Ube4aE9Q735 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ube4aE9Q735 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ube4aE9Q735 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ube4aE9Q735 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.94■□□□□ 0.78
Ube4aE9Q735 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC19.94■□□□□ 0.78
Ube4aE9Q735 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ube4aE9Q735 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ube4aE9Q735 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ube4aE9Q735 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ube4aE9Q735 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ube4aE9Q735 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ube4aE9Q735 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Ube4aE9Q735 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.93■□□□□ 0.78
Ube4aE9Q735 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ube4aE9Q735 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ube4aE9Q735 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ube4aE9Q735 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ube4aE9Q735 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Ube4aE9Q735 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Ube4aE9Q735 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ube4aE9Q735 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC19.93■□□□□ 0.78
Ube4aE9Q735 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ube4aE9Q735 AW822252-206ENSMUST00000208904 237 ntBASIC19.93■□□□□ 0.78
Ube4aE9Q735 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC19.93■□□□□ 0.78
Ube4aE9Q735 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Ube4aE9Q735 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ube4aE9Q735 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ube4aE9Q735 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ube4aE9Q735 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.93■□□□□ 0.78
Ube4aE9Q735 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ube4aE9Q735 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ube4aE9Q735 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ube4aE9Q735 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ube4aE9Q735 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.93■□□□□ 0.78
Ube4aE9Q735 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ube4aE9Q735 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Ube4aE9Q735 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ube4aE9Q735 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ube4aE9Q735 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC19.92■□□□□ 0.78
Ube4aE9Q735 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
Ube4aE9Q735 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC19.92■□□□□ 0.78
Ube4aE9Q735 Gm36967-201ENSMUST00000193814 266 ntBASIC19.92■□□□□ 0.78
Ube4aE9Q735 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC19.92■□□□□ 0.78
Ube4aE9Q735 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ube4aE9Q735 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ube4aE9Q735 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Ube4aE9Q735 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ube4aE9Q735 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC19.92■□□□□ 0.78
Ube4aE9Q735 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ube4aE9Q735 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ube4aE9Q735 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ube4aE9Q735 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Ube4aE9Q735 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ube4aE9Q735 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Ube4aE9Q735 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ube4aE9Q735 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ube4aE9Q735 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
Ube4aE9Q735 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ube4aE9Q735 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ube4aE9Q735 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Ube4aE9Q735 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ube4aE9Q735 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ube4aE9Q735 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Ube4aE9Q735 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ube4aE9Q735 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC19.91■□□□□ 0.78
Ube4aE9Q735 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ube4aE9Q735 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ube4aE9Q735 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ube4aE9Q735 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC19.91■□□□□ 0.78
Ube4aE9Q735 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Ube4aE9Q735 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ube4aE9Q735 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ube4aE9Q735 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ube4aE9Q735 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ube4aE9Q735 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ube4aE9Q735 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ube4aE9Q735 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ube4aE9Q735 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Ube4aE9Q735 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.9■□□□□ 0.78
Ube4aE9Q735 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ube4aE9Q735 Gm25745-201ENSMUST00000174945 133 ntBASIC19.9■□□□□ 0.78
Ube4aE9Q735 Gm7507-201ENSMUST00000183053 1008 ntBASIC19.9■□□□□ 0.78
Ube4aE9Q735 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC19.9■□□□□ 0.78
Ube4aE9Q735 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ube4aE9Q735 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ube4aE9Q735 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ube4aE9Q735 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Ube4aE9Q735 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ube4aE9Q735 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms