Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb9E9Q5G2 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.57■□□□□ 0.72
Pcdhb9E9Q5G2 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb9E9Q5G2 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb9E9Q5G2 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.57■□□□□ 0.72
Pcdhb9E9Q5G2 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Pcdhb9E9Q5G2 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb9E9Q5G2 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Pcdhb9E9Q5G2 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
Pcdhb9E9Q5G2 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb9E9Q5G2 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb9E9Q5G2 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb9E9Q5G2 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb9E9Q5G2 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Pcdhb9E9Q5G2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb9E9Q5G2 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb9E9Q5G2 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Pcdhb9E9Q5G2 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb9E9Q5G2 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC19.56■□□□□ 0.72
Pcdhb9E9Q5G2 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Pcdhb9E9Q5G2 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Pcdhb9E9Q5G2 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Pcdhb9E9Q5G2 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb9E9Q5G2 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.56■□□□□ 0.72
Pcdhb9E9Q5G2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb9E9Q5G2 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb9E9Q5G2 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb9E9Q5G2 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Pcdhb9E9Q5G2 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb9E9Q5G2 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.55■□□□□ 0.72
Pcdhb9E9Q5G2 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb9E9Q5G2 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb9E9Q5G2 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb9E9Q5G2 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb9E9Q5G2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb9E9Q5G2 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb9E9Q5G2 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb9E9Q5G2 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb9E9Q5G2 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Pcdhb9E9Q5G2 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb9E9Q5G2 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Pcdhb9E9Q5G2 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb9E9Q5G2 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb9E9Q5G2 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.54■□□□□ 0.72
Pcdhb9E9Q5G2 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Pcdhb9E9Q5G2 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb9E9Q5G2 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.54■□□□□ 0.72
Pcdhb9E9Q5G2 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb9E9Q5G2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Pcdhb9E9Q5G2 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb9E9Q5G2 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb9E9Q5G2 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb9E9Q5G2 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb9E9Q5G2 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb9E9Q5G2 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb9E9Q5G2 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC19.53■□□□□ 0.72
Pcdhb9E9Q5G2 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb9E9Q5G2 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb9E9Q5G2 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb9E9Q5G2 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb9E9Q5G2 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.53■□□□□ 0.72
Pcdhb9E9Q5G2 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC19.53■□□□□ 0.72
Pcdhb9E9Q5G2 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
Pcdhb9E9Q5G2 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Pcdhb9E9Q5G2 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb9E9Q5G2 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb9E9Q5G2 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb9E9Q5G2 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb9E9Q5G2 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC19.53■□□□□ 0.72
Pcdhb9E9Q5G2 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb9E9Q5G2 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb9E9Q5G2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb9E9Q5G2 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb9E9Q5G2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb9E9Q5G2 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb9E9Q5G2 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.52■□□□□ 0.72
Pcdhb9E9Q5G2 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb9E9Q5G2 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb9E9Q5G2 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb9E9Q5G2 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb9E9Q5G2 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.52■□□□□ 0.71
Pcdhb9E9Q5G2 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb9E9Q5G2 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb9E9Q5G2 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb9E9Q5G2 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb9E9Q5G2 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb9E9Q5G2 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb9E9Q5G2 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb9E9Q5G2 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb9E9Q5G2 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Pcdhb9E9Q5G2 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb9E9Q5G2 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb9E9Q5G2 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Pcdhb9E9Q5G2 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb9E9Q5G2 Gm27357-201ENSMUST00000183754 135 ntBASIC19.51■□□□□ 0.71
Pcdhb9E9Q5G2 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.51■□□□□ 0.71
Pcdhb9E9Q5G2 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.51■□□□□ 0.71
Pcdhb9E9Q5G2 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.51■□□□□ 0.71
Pcdhb9E9Q5G2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb9E9Q5G2 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms