Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rnf213E9Q555 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rnf213E9Q555 Mir1895-201ENSMUST00000122615 79 ntBASIC8.03□□□□□ -1.12
Rnf213E9Q555 Gm7507-201ENSMUST00000183053 1008 ntBASIC8.03□□□□□ -1.12
Rnf213E9Q555 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rnf213E9Q555 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rnf213E9Q555 Gm43545-201ENSMUST00000196765 2779 ntBASIC8.03□□□□□ -1.12
Rnf213E9Q555 Gm12151-201ENSMUST00000121374 290 ntBASIC8.03□□□□□ -1.12
Rnf213E9Q555 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC8.03□□□□□ -1.12
Rnf213E9Q555 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC8.03□□□□□ -1.12
Rnf213E9Q555 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC8.03□□□□□ -1.12
Rnf213E9Q555 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rnf213E9Q555 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rnf213E9Q555 Ddx41-204ENSMUST00000224765 2199 ntBASIC8.03□□□□□ -1.12
Rnf213E9Q555 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rnf213E9Q555 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rnf213E9Q555 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rnf213E9Q555 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rnf213E9Q555 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rnf213E9Q555 AC154767.3-201ENSMUST00000225150 1342 ntBASIC8.03□□□□□ -1.12
Rnf213E9Q555 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC8.02□□□□□ -1.12
Rnf213E9Q555 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC8.02□□□□□ -1.12
Rnf213E9Q555 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC8.02□□□□□ -1.12
Rnf213E9Q555 Gm2308-201ENSMUST00000166539 1004 ntBASIC8.02□□□□□ -1.12
Rnf213E9Q555 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC8.02□□□□□ -1.12
Rnf213E9Q555 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC8.02□□□□□ -1.12
Rnf213E9Q555 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
Rnf213E9Q555 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rnf213E9Q555 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rnf213E9Q555 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rnf213E9Q555 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rnf213E9Q555 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rnf213E9Q555 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rnf213E9Q555 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rnf213E9Q555 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rnf213E9Q555 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rnf213E9Q555 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC8.02□□□□□ -1.13
Rnf213E9Q555 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC8.02□□□□□ -1.13
Rnf213E9Q555 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rnf213E9Q555 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC8.02□□□□□ -1.13
Rnf213E9Q555 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC8.02□□□□□ -1.13
Rnf213E9Q555 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rnf213E9Q555 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rnf213E9Q555 Gm17271-201ENSMUST00000165535 355 ntBASIC8.02□□□□□ -1.13
Rnf213E9Q555 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rnf213E9Q555 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rnf213E9Q555 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rnf213E9Q555 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Rnf213E9Q555 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rnf213E9Q555 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rnf213E9Q555 Gm37153-201ENSMUST00000193637 231 ntBASIC8.02□□□□□ -1.13
Rnf213E9Q555 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rnf213E9Q555 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rnf213E9Q555 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Rnf213E9Q555 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rnf213E9Q555 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rnf213E9Q555 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rnf213E9Q555 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rnf213E9Q555 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Rnf213E9Q555 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rnf213E9Q555 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC8.01□□□□□ -1.13
Rnf213E9Q555 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Rnf213E9Q555 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rnf213E9Q555 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
Rnf213E9Q555 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rnf213E9Q555 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Rnf213E9Q555 AC125311.2-201ENSMUST00000227477 1940 ntBASIC8.01□□□□□ -1.13
Rnf213E9Q555 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC8.01□□□□□ -1.13
Rnf213E9Q555 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC8.01□□□□□ -1.13
Rnf213E9Q555 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rnf213E9Q555 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rnf213E9Q555 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Rnf213E9Q555 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Rnf213E9Q555 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rnf213E9Q555 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rnf213E9Q555 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Rnf213E9Q555 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rnf213E9Q555 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rnf213E9Q555 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC8.01□□□□□ -1.13
Rnf213E9Q555 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rnf213E9Q555 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC8.01□□□□□ -1.13
Rnf213E9Q555 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC8.01□□□□□ -1.13
Rnf213E9Q555 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC8.01□□□□□ -1.13
Rnf213E9Q555 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC8.01□□□□□ -1.13
Rnf213E9Q555 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rnf213E9Q555 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rnf213E9Q555 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rnf213E9Q555 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rnf213E9Q555 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Rnf213E9Q555 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC8.01□□□□□ -1.13
Rnf213E9Q555 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rnf213E9Q555 Gm6226-201ENSMUST00000117765 1146 ntBASIC8.01□□□□□ -1.13
Rnf213E9Q555 Rprl2-201ENSMUST00000157150 290 ntBASIC8.01□□□□□ -1.13
Rnf213E9Q555 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC8.01□□□□□ -1.13
Rnf213E9Q555 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC8.01□□□□□ -1.13
Rnf213E9Q555 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Rnf213E9Q555 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Rnf213E9Q555 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rnf213E9Q555 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rnf213E9Q555 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC8□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms