Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Gm28043E0CXC2 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.71■□□□□ 0.27
Gm28043E0CXC2 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Gm28043E0CXC2 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm28043E0CXC2 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm28043E0CXC2 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm28043E0CXC2 Gm4974-201ENSMUST00000209974 875 ntBASIC16.71■□□□□ 0.27
Gm28043E0CXC2 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm28043E0CXC2 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm28043E0CXC2 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm28043E0CXC2 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Gm28043E0CXC2 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Gm28043E0CXC2 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.71■□□□□ 0.27
Gm28043E0CXC2 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm28043E0CXC2 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm28043E0CXC2 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Gm28043E0CXC2 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
Gm28043E0CXC2 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.7■□□□□ 0.26
Gm28043E0CXC2 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Gm28043E0CXC2 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Gm28043E0CXC2 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Gm28043E0CXC2 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm28043E0CXC2 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Gm28043E0CXC2 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm28043E0CXC2 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm28043E0CXC2 Mir1199-201ENSMUST00000117015 119 ntBASIC16.7■□□□□ 0.26
Gm28043E0CXC2 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm28043E0CXC2 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.7■□□□□ 0.26
Gm28043E0CXC2 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Gm28043E0CXC2 Gm10517-202ENSMUST00000192970 758 ntBASIC16.7■□□□□ 0.26
Gm28043E0CXC2 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Gm28043E0CXC2 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm28043E0CXC2 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.7■□□□□ 0.26
Gm28043E0CXC2 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Gm28043E0CXC2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm28043E0CXC2 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.7■□□□□ 0.26
Gm28043E0CXC2 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm28043E0CXC2 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Gm28043E0CXC2 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Gm28043E0CXC2 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm28043E0CXC2 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Gm28043E0CXC2 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm28043E0CXC2 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm28043E0CXC2 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gm28043E0CXC2 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gm28043E0CXC2 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm28043E0CXC2 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm28043E0CXC2 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.69■□□□□ 0.26
Gm28043E0CXC2 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Gm28043E0CXC2 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm28043E0CXC2 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm28043E0CXC2 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm28043E0CXC2 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm28043E0CXC2 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.69■□□□□ 0.26
Gm28043E0CXC2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.69■□□□□ 0.26
Gm28043E0CXC2 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Gm28043E0CXC2 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm28043E0CXC2 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.69■□□□□ 0.26
Gm28043E0CXC2 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.69■□□□□ 0.26
Gm28043E0CXC2 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.69■□□□□ 0.26
Gm28043E0CXC2 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm28043E0CXC2 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Gm28043E0CXC2 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Gm28043E0CXC2 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm28043E0CXC2 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm28043E0CXC2 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm28043E0CXC2 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm28043E0CXC2 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm28043E0CXC2 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Gm28043E0CXC2 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm28043E0CXC2 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm28043E0CXC2 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm28043E0CXC2 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm28043E0CXC2 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm28043E0CXC2 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.69■□□□□ 0.26
Gm28043E0CXC2 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm28043E0CXC2 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.68■□□□□ 0.26
Gm28043E0CXC2 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm28043E0CXC2 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm28043E0CXC2 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.68■□□□□ 0.26
Gm28043E0CXC2 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm28043E0CXC2 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm28043E0CXC2 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm28043E0CXC2 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm28043E0CXC2 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm28043E0CXC2 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Gm28043E0CXC2 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Gm28043E0CXC2 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Gm28043E0CXC2 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Gm28043E0CXC2 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.68■□□□□ 0.26
Gm28043E0CXC2 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
Gm28043E0CXC2 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Gm28043E0CXC2 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm28043E0CXC2 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm28043E0CXC2 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Gm28043E0CXC2 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.68■□□□□ 0.26
Gm28043E0CXC2 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm28043E0CXC2 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Gm28043E0CXC2 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm28043E0CXC2 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms