Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.86□□□□□ -0.03
Shank1D3YZU1 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shank1D3YZU1 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shank1D3YZU1 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Shank1D3YZU1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shank1D3YZU1 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shank1D3YZU1 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shank1D3YZU1 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shank1D3YZU1 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shank1D3YZU1 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Shank1D3YZU1 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shank1D3YZU1 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.85□□□□□ -0.03
Shank1D3YZU1 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.85□□□□□ -0.03
Shank1D3YZU1 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.85□□□□□ -0.03
Shank1D3YZU1 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shank1D3YZU1 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shank1D3YZU1 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shank1D3YZU1 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shank1D3YZU1 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Shank1D3YZU1 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shank1D3YZU1 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shank1D3YZU1 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shank1D3YZU1 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shank1D3YZU1 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shank1D3YZU1 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.85□□□□□ -0.03
Shank1D3YZU1 Gm7230-201ENSMUST00000173026 815 ntBASIC14.85□□□□□ -0.03
Shank1D3YZU1 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.85□□□□□ -0.03
Shank1D3YZU1 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shank1D3YZU1 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shank1D3YZU1 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Shank1D3YZU1 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shank1D3YZU1 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shank1D3YZU1 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shank1D3YZU1 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Shank1D3YZU1 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Shank1D3YZU1 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shank1D3YZU1 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Shank1D3YZU1 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shank1D3YZU1 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shank1D3YZU1 Gm2213-201ENSMUST00000197485 688 ntBASIC14.84□□□□□ -0.03
Shank1D3YZU1 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Shank1D3YZU1 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.84□□□□□ -0.03
Shank1D3YZU1 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC14.84□□□□□ -0.03
Shank1D3YZU1 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Shank1D3YZU1 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shank1D3YZU1 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shank1D3YZU1 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shank1D3YZU1 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shank1D3YZU1 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.84□□□□□ -0.03
Shank1D3YZU1 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Shank1D3YZU1 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shank1D3YZU1 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shank1D3YZU1 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shank1D3YZU1 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.84□□□□□ -0.03
Shank1D3YZU1 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shank1D3YZU1 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Shank1D3YZU1 Gm14494-201ENSMUST00000118786 435 ntBASIC14.84□□□□□ -0.03
Shank1D3YZU1 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.84□□□□□ -0.03
Shank1D3YZU1 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Shank1D3YZU1 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Shank1D3YZU1 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shank1D3YZU1 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shank1D3YZU1 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shank1D3YZU1 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shank1D3YZU1 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Shank1D3YZU1 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Shank1D3YZU1 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Shank1D3YZU1 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Shank1D3YZU1 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Shank1D3YZU1 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
Shank1D3YZU1 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shank1D3YZU1 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Shank1D3YZU1 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shank1D3YZU1 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shank1D3YZU1 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shank1D3YZU1 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Shank1D3YZU1 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Shank1D3YZU1 Gm44430-201ENSMUST00000203376 995 ntBASIC14.83□□□□□ -0.04
Shank1D3YZU1 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shank1D3YZU1 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Shank1D3YZU1 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shank1D3YZU1 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shank1D3YZU1 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Shank1D3YZU1 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Shank1D3YZU1 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Shank1D3YZU1 Gm12260-201ENSMUST00000122447 411 ntBASIC14.83□□□□□ -0.04
Shank1D3YZU1 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Shank1D3YZU1 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shank1D3YZU1 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Shank1D3YZU1 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.82□□□□□ -0.04
Shank1D3YZU1 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Shank1D3YZU1 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Shank1D3YZU1 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shank1D3YZU1 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.82□□□□□ -0.04
Shank1D3YZU1 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shank1D3YZU1 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.82□□□□□ -0.04
Shank1D3YZU1 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Shank1D3YZU1 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.82□□□□□ -0.04
Shank1D3YZU1 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shank1D3YZU1 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms