Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clrn2B2RVW2 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clrn2B2RVW2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clrn2B2RVW2 Gm32996-201ENSMUST00000199828 1447 ntBASIC19.24■□□□□ 0.67
Clrn2B2RVW2 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clrn2B2RVW2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clrn2B2RVW2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Clrn2B2RVW2 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.24■□□□□ 0.67
Clrn2B2RVW2 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clrn2B2RVW2 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clrn2B2RVW2 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clrn2B2RVW2 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Clrn2B2RVW2 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clrn2B2RVW2 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clrn2B2RVW2 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Clrn2B2RVW2 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clrn2B2RVW2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Clrn2B2RVW2 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clrn2B2RVW2 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clrn2B2RVW2 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clrn2B2RVW2 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clrn2B2RVW2 Gm25745-201ENSMUST00000174945 133 ntBASIC19.23■□□□□ 0.67
Clrn2B2RVW2 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Clrn2B2RVW2 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC19.23■□□□□ 0.67
Clrn2B2RVW2 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clrn2B2RVW2 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
Clrn2B2RVW2 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clrn2B2RVW2 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Clrn2B2RVW2 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clrn2B2RVW2 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Clrn2B2RVW2 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Clrn2B2RVW2 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clrn2B2RVW2 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Clrn2B2RVW2 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clrn2B2RVW2 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clrn2B2RVW2 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clrn2B2RVW2 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Clrn2B2RVW2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clrn2B2RVW2 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Clrn2B2RVW2 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Clrn2B2RVW2 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Clrn2B2RVW2 Gm12350-201ENSMUST00000121208 462 ntBASIC19.22■□□□□ 0.67
Clrn2B2RVW2 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC19.22■□□□□ 0.67
Clrn2B2RVW2 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clrn2B2RVW2 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Clrn2B2RVW2 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clrn2B2RVW2 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC19.22■□□□□ 0.67
Clrn2B2RVW2 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clrn2B2RVW2 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Clrn2B2RVW2 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clrn2B2RVW2 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Clrn2B2RVW2 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Clrn2B2RVW2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clrn2B2RVW2 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clrn2B2RVW2 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Clrn2B2RVW2 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.22■□□□□ 0.67
Clrn2B2RVW2 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clrn2B2RVW2 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC19.22■□□□□ 0.67
Clrn2B2RVW2 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clrn2B2RVW2 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clrn2B2RVW2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clrn2B2RVW2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clrn2B2RVW2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clrn2B2RVW2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clrn2B2RVW2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clrn2B2RVW2 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clrn2B2RVW2 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC19.21■□□□□ 0.67
Clrn2B2RVW2 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Clrn2B2RVW2 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clrn2B2RVW2 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.21■□□□□ 0.67
Clrn2B2RVW2 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
Clrn2B2RVW2 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC19.21■□□□□ 0.67
Clrn2B2RVW2 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Clrn2B2RVW2 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clrn2B2RVW2 CT009713.7-201ENSMUST00000224689 571 ntBASIC19.21■□□□□ 0.67
Clrn2B2RVW2 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Clrn2B2RVW2 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clrn2B2RVW2 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Clrn2B2RVW2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clrn2B2RVW2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clrn2B2RVW2 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Clrn2B2RVW2 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Clrn2B2RVW2 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC19.21■□□□□ 0.67
Clrn2B2RVW2 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Clrn2B2RVW2 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.21■□□□□ 0.66
Clrn2B2RVW2 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.2■□□□□ 0.66
Clrn2B2RVW2 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Clrn2B2RVW2 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clrn2B2RVW2 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clrn2B2RVW2 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clrn2B2RVW2 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Clrn2B2RVW2 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Clrn2B2RVW2 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clrn2B2RVW2 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clrn2B2RVW2 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Clrn2B2RVW2 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Clrn2B2RVW2 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clrn2B2RVW2 Gm11594-201ENSMUST00000122313 162 ntBASIC19.2■□□□□ 0.66
Clrn2B2RVW2 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clrn2B2RVW2 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms