Protein–RNA interactions for Protein: A8DUK4

Hbb-bs, Beta-globin, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-bsA8DUK4 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Hbb-bsA8DUK4 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hbb-bsA8DUK4 AC154412.1-201ENSMUST00000226540 2786 ntBASIC11.8□□□□□ -0.52
Hbb-bsA8DUK4 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hbb-bsA8DUK4 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hbb-bsA8DUK4 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hbb-bsA8DUK4 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC11.8□□□□□ -0.52
Hbb-bsA8DUK4 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hbb-bsA8DUK4 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hbb-bsA8DUK4 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hbb-bsA8DUK4 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hbb-bsA8DUK4 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Hbb-bsA8DUK4 Gm7417-201ENSMUST00000192950 473 ntBASIC11.8□□□□□ -0.52
Hbb-bsA8DUK4 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hbb-bsA8DUK4 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hbb-bsA8DUK4 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hbb-bsA8DUK4 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Hbb-bsA8DUK4 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC11.8□□□□□ -0.52
Hbb-bsA8DUK4 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hbb-bsA8DUK4 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hbb-bsA8DUK4 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Hbb-bsA8DUK4 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Hbb-bsA8DUK4 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hbb-bsA8DUK4 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hbb-bsA8DUK4 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hbb-bsA8DUK4 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hbb-bsA8DUK4 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hbb-bsA8DUK4 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hbb-bsA8DUK4 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hbb-bsA8DUK4 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hbb-bsA8DUK4 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hbb-bsA8DUK4 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Hbb-bsA8DUK4 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-bsA8DUK4 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-bsA8DUK4 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Hbb-bsA8DUK4 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-bsA8DUK4 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC11.79□□□□□ -0.52
Hbb-bsA8DUK4 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Hbb-bsA8DUK4 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC11.79□□□□□ -0.52
Hbb-bsA8DUK4 AC115863.1-201ENSMUST00000214815 1813 ntBASIC11.79□□□□□ -0.52
Hbb-bsA8DUK4 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-bsA8DUK4 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-bsA8DUK4 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-bsA8DUK4 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-bsA8DUK4 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-bsA8DUK4 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Hbb-bsA8DUK4 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Hbb-bsA8DUK4 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-bsA8DUK4 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-bsA8DUK4 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC11.79□□□□□ -0.52
Hbb-bsA8DUK4 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-bsA8DUK4 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-bsA8DUK4 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC11.79□□□□□ -0.52
Hbb-bsA8DUK4 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-bsA8DUK4 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-bsA8DUK4 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-bsA8DUK4 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-bsA8DUK4 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-bsA8DUK4 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-bsA8DUK4 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-bsA8DUK4 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-bsA8DUK4 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-bsA8DUK4 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-bsA8DUK4 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Hbb-bsA8DUK4 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-bsA8DUK4 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-bsA8DUK4 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-bsA8DUK4 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-bsA8DUK4 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-bsA8DUK4 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hbb-bsA8DUK4 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hbb-bsA8DUK4 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC11.78□□□□□ -0.52
Hbb-bsA8DUK4 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hbb-bsA8DUK4 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hbb-bsA8DUK4 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hbb-bsA8DUK4 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hbb-bsA8DUK4 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hbb-bsA8DUK4 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC11.78□□□□□ -0.52
Hbb-bsA8DUK4 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hbb-bsA8DUK4 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hbb-bsA8DUK4 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hbb-bsA8DUK4 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Hbb-bsA8DUK4 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Hbb-bsA8DUK4 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hbb-bsA8DUK4 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hbb-bsA8DUK4 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hbb-bsA8DUK4 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hbb-bsA8DUK4 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Hbb-bsA8DUK4 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Hbb-bsA8DUK4 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hbb-bsA8DUK4 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hbb-bsA8DUK4 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hbb-bsA8DUK4 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Hbb-bsA8DUK4 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hbb-bsA8DUK4 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Hbb-bsA8DUK4 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hbb-bsA8DUK4 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hbb-bsA8DUK4 Ccdc166-201ENSMUST00000182172 2584 ntBASIC11.77□□□□□ -0.52
Hbb-bsA8DUK4 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Hbb-bsA8DUK4 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms