Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Krt28A6BLY7 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Krt28A6BLY7 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Krt28A6BLY7 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Krt28A6BLY7 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Krt28A6BLY7 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Krt28A6BLY7 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Krt28A6BLY7 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.42■□□□□ 0.54
Krt28A6BLY7 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
Krt28A6BLY7 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.42■□□□□ 0.54
Krt28A6BLY7 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Krt28A6BLY7 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Krt28A6BLY7 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Krt28A6BLY7 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Krt28A6BLY7 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.42■□□□□ 0.54
Krt28A6BLY7 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Krt28A6BLY7 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Krt28A6BLY7 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Krt28A6BLY7 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Krt28A6BLY7 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Krt28A6BLY7 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Krt28A6BLY7 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Krt28A6BLY7 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Krt28A6BLY7 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Krt28A6BLY7 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Krt28A6BLY7 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Krt28A6BLY7 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Krt28A6BLY7 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Krt28A6BLY7 Gm15920-201ENSMUST00000118998 402 ntBASIC18.41■□□□□ 0.54
Krt28A6BLY7 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Krt28A6BLY7 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Krt28A6BLY7 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
Krt28A6BLY7 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC18.41■□□□□ 0.54
Krt28A6BLY7 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC18.41■□□□□ 0.54
Krt28A6BLY7 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Krt28A6BLY7 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Krt28A6BLY7 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Krt28A6BLY7 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Krt28A6BLY7 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Krt28A6BLY7 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Krt28A6BLY7 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Krt28A6BLY7 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Krt28A6BLY7 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Krt28A6BLY7 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Krt28A6BLY7 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Krt28A6BLY7 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Krt28A6BLY7 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
Krt28A6BLY7 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Krt28A6BLY7 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Krt28A6BLY7 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.4■□□□□ 0.54
Krt28A6BLY7 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Krt28A6BLY7 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Krt28A6BLY7 AC122901.1-201ENSMUST00000214203 1790 ntBASIC18.4■□□□□ 0.54
Krt28A6BLY7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Krt28A6BLY7 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Krt28A6BLY7 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Krt28A6BLY7 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Krt28A6BLY7 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.4■□□□□ 0.54
Krt28A6BLY7 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Krt28A6BLY7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Krt28A6BLY7 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
Krt28A6BLY7 Gm8097-201ENSMUST00000117903 829 ntBASIC18.4■□□□□ 0.54
Krt28A6BLY7 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Krt28A6BLY7 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Krt28A6BLY7 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Krt28A6BLY7 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Krt28A6BLY7 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC18.4■□□□□ 0.54
Krt28A6BLY7 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Krt28A6BLY7 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Krt28A6BLY7 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.4■□□□□ 0.54
Krt28A6BLY7 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Krt28A6BLY7 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Krt28A6BLY7 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Krt28A6BLY7 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Krt28A6BLY7 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Krt28A6BLY7 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Krt28A6BLY7 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Krt28A6BLY7 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Krt28A6BLY7 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC18.39■□□□□ 0.53
Krt28A6BLY7 Gm7222-201ENSMUST00000117512 906 ntBASIC18.39■□□□□ 0.53
Krt28A6BLY7 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18.39■□□□□ 0.53
Krt28A6BLY7 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Krt28A6BLY7 Gm11780-201ENSMUST00000136880 516 ntBASIC18.39■□□□□ 0.53
Krt28A6BLY7 Gm12497-201ENSMUST00000138778 237 ntBASIC18.39■□□□□ 0.53
Krt28A6BLY7 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Krt28A6BLY7 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Krt28A6BLY7 Gm8655-201ENSMUST00000221159 852 ntBASIC18.39■□□□□ 0.53
Krt28A6BLY7 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Krt28A6BLY7 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Krt28A6BLY7 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC18.39■□□□□ 0.53
Krt28A6BLY7 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Krt28A6BLY7 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Krt28A6BLY7 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Krt28A6BLY7 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Krt28A6BLY7 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Krt28A6BLY7 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Krt28A6BLY7 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Krt28A6BLY7 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Krt28A6BLY7 Gm5648-201ENSMUST00000122244 1587 ntBASIC18.38■□□□□ 0.53
Krt28A6BLY7 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms