Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Ubr4A2AN08 Gm23984-201ENSMUST00000157139 203 ntBASIC8.75□□□□□ -1.01
Ubr4A2AN08 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC8.75□□□□□ -1.01
Ubr4A2AN08 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC8.75□□□□□ -1.01
Ubr4A2AN08 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Ubr4A2AN08 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Ubr4A2AN08 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Ubr4A2AN08 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
Ubr4A2AN08 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Ubr4A2AN08 Gm42922-201ENSMUST00000195887 2078 ntBASIC8.75□□□□□ -1.01
Ubr4A2AN08 Gm12138-201ENSMUST00000122180 951 ntBASIC8.75□□□□□ -1.01
Ubr4A2AN08 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Ubr4A2AN08 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC8.75□□□□□ -1.01
Ubr4A2AN08 Gm43179-201ENSMUST00000198797 275 ntBASIC8.75□□□□□ -1.01
Ubr4A2AN08 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Ubr4A2AN08 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Ubr4A2AN08 CT025626.1-201ENSMUST00000223735 1455 ntBASIC8.75□□□□□ -1.01
Ubr4A2AN08 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Ubr4A2AN08 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC8.75□□□□□ -1.01
Ubr4A2AN08 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Ubr4A2AN08 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Ubr4A2AN08 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Ubr4A2AN08 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC8.75□□□□□ -1.01
Ubr4A2AN08 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
Ubr4A2AN08 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC8.75□□□□□ -1.01
Ubr4A2AN08 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Ubr4A2AN08 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC8.75□□□□□ -1.01
Ubr4A2AN08 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Ubr4A2AN08 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Ubr4A2AN08 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Ubr4A2AN08 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Ubr4A2AN08 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Ubr4A2AN08 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC8.75□□□□□ -1.01
Ubr4A2AN08 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Ubr4A2AN08 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC8.74□□□□□ -1.01
Ubr4A2AN08 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC8.74□□□□□ -1.01
Ubr4A2AN08 Gm27430-201ENSMUST00000184585 107 ntBASIC8.74□□□□□ -1.01
Ubr4A2AN08 Gm44333-201ENSMUST00000197168 107 ntBASIC8.74□□□□□ -1.01
Ubr4A2AN08 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Ubr4A2AN08 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Ubr4A2AN08 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Ubr4A2AN08 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Ubr4A2AN08 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Ubr4A2AN08 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Ubr4A2AN08 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Ubr4A2AN08 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC8.74□□□□□ -1.01
Ubr4A2AN08 Gm15236-201ENSMUST00000117309 379 ntBASIC8.74□□□□□ -1.01
Ubr4A2AN08 Gm6226-201ENSMUST00000117765 1146 ntBASIC8.74□□□□□ -1.01
Ubr4A2AN08 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Ubr4A2AN08 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC8.74□□□□□ -1.01
Ubr4A2AN08 AC135669.1-201ENSMUST00000213585 412 ntBASIC8.74□□□□□ -1.01
Ubr4A2AN08 AC166349.1-201ENSMUST00000220866 695 ntBASIC8.74□□□□□ -1.01
Ubr4A2AN08 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Ubr4A2AN08 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Ubr4A2AN08 Gm7856-201ENSMUST00000117514 1493 ntBASIC8.74□□□□□ -1.01
Ubr4A2AN08 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Ubr4A2AN08 Gm13461-201ENSMUST00000120980 662 ntBASIC8.74□□□□□ -1.01
Ubr4A2AN08 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC8.74□□□□□ -1.01
Ubr4A2AN08 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC8.74□□□□□ -1.01
Ubr4A2AN08 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Ubr4A2AN08 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC8.74□□□□□ -1.01
Ubr4A2AN08 AC124732.2-201ENSMUST00000221977 316 ntBASIC8.74□□□□□ -1.01
Ubr4A2AN08 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Ubr4A2AN08 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Ubr4A2AN08 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Ubr4A2AN08 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Ubr4A2AN08 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Ubr4A2AN08 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Ubr4A2AN08 CT009713.10-202ENSMUST00000225734 696 ntBASIC8.73□□□□□ -1.01
Ubr4A2AN08 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ubr4A2AN08 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Ubr4A2AN08 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Ubr4A2AN08 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Ubr4A2AN08 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ubr4A2AN08 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ubr4A2AN08 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ubr4A2AN08 Gm18753-201ENSMUST00000201000 566 ntBASIC8.73□□□□□ -1.01
Ubr4A2AN08 AC154171.1-201ENSMUST00000224610 643 ntBASIC8.73□□□□□ -1.01
Ubr4A2AN08 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Ubr4A2AN08 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Ubr4A2AN08 Gm13042-201ENSMUST00000119244 1955 ntBASIC8.73□□□□□ -1.01
Ubr4A2AN08 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ubr4A2AN08 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ubr4A2AN08 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Ubr4A2AN08 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Ubr4A2AN08 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Ubr4A2AN08 Gm17150-201ENSMUST00000165577 381 ntBASIC8.73□□□□□ -1.01
Ubr4A2AN08 Gm5779-201ENSMUST00000218467 910 ntBASIC8.73□□□□□ -1.01
Ubr4A2AN08 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Ubr4A2AN08 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ubr4A2AN08 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ubr4A2AN08 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Ubr4A2AN08 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ubr4A2AN08 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ubr4A2AN08 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ubr4A2AN08 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ubr4A2AN08 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ubr4A2AN08 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ubr4A2AN08 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ubr4A2AN08 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms