Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Shroom2A2ALU4 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Shroom2A2ALU4 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC26.18■■□□□ 1.78
Shroom2A2ALU4 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC26.18■■□□□ 1.78
Shroom2A2ALU4 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC26.18■■□□□ 1.78
Shroom2A2ALU4 Gm43433-201ENSMUST00000196573 481 ntBASIC26.18■■□□□ 1.78
Shroom2A2ALU4 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC26.18■■□□□ 1.78
Shroom2A2ALU4 Cdk7-205ENSMUST00000225990 1159 ntBASIC26.18■■□□□ 1.78
Shroom2A2ALU4 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Shroom2A2ALU4 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
Shroom2A2ALU4 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
Shroom2A2ALU4 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Shroom2A2ALU4 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Shroom2A2ALU4 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Shroom2A2ALU4 Gm15222-202ENSMUST00000228667 1726 ntBASIC26.18■■□□□ 1.78
Shroom2A2ALU4 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Shroom2A2ALU4 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
Shroom2A2ALU4 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Shroom2A2ALU4 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Shroom2A2ALU4 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Shroom2A2ALU4 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Shroom2A2ALU4 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Shroom2A2ALU4 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
Shroom2A2ALU4 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
Shroom2A2ALU4 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC26.17■■□□□ 1.78
Shroom2A2ALU4 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Shroom2A2ALU4 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Shroom2A2ALU4 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
Shroom2A2ALU4 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Shroom2A2ALU4 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Shroom2A2ALU4 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC26.16■■□□□ 1.78
Shroom2A2ALU4 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Shroom2A2ALU4 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Shroom2A2ALU4 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Shroom2A2ALU4 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Shroom2A2ALU4 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Shroom2A2ALU4 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Shroom2A2ALU4 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Shroom2A2ALU4 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Shroom2A2ALU4 AC154767.3-201ENSMUST00000225150 1342 ntBASIC26.15■■□□□ 1.78
Shroom2A2ALU4 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
Shroom2A2ALU4 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC26.15■■□□□ 1.78
Shroom2A2ALU4 Gm4899-201ENSMUST00000178708 719 ntBASIC26.15■■□□□ 1.78
Shroom2A2ALU4 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC26.15■■□□□ 1.78
Shroom2A2ALU4 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Shroom2A2ALU4 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Shroom2A2ALU4 Gm15442-201ENSMUST00000117905 1527 ntBASIC26.14■■□□□ 1.78
Shroom2A2ALU4 Gm25406-201ENSMUST00000157599 105 ntBASIC26.14■■□□□ 1.78
Shroom2A2ALU4 Gm18187-201ENSMUST00000196476 984 ntBASIC26.14■■□□□ 1.78
Shroom2A2ALU4 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Shroom2A2ALU4 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC26.14■■□□□ 1.78
Shroom2A2ALU4 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Shroom2A2ALU4 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.77
Shroom2A2ALU4 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Shroom2A2ALU4 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.77
Shroom2A2ALU4 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Shroom2A2ALU4 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC26.13■■□□□ 1.77
Shroom2A2ALU4 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Shroom2A2ALU4 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
Shroom2A2ALU4 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
Shroom2A2ALU4 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Shroom2A2ALU4 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Shroom2A2ALU4 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Shroom2A2ALU4 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Shroom2A2ALU4 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Shroom2A2ALU4 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Shroom2A2ALU4 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Shroom2A2ALU4 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC26.13■■□□□ 1.77
Shroom2A2ALU4 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Shroom2A2ALU4 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Shroom2A2ALU4 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Shroom2A2ALU4 Gm2308-201ENSMUST00000166539 1004 ntBASIC26.12■■□□□ 1.77
Shroom2A2ALU4 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC26.12■■□□□ 1.77
Shroom2A2ALU4 AC125350.2-201ENSMUST00000224737 727 ntBASIC26.12■■□□□ 1.77
Shroom2A2ALU4 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Shroom2A2ALU4 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC26.12■■□□□ 1.77
Shroom2A2ALU4 Gm42934-201ENSMUST00000196920 1345 ntBASIC26.12■■□□□ 1.77
Shroom2A2ALU4 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Shroom2A2ALU4 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Shroom2A2ALU4 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Shroom2A2ALU4 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC26.11■■□□□ 1.77
Shroom2A2ALU4 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Shroom2A2ALU4 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC26.11■■□□□ 1.77
Shroom2A2ALU4 AC127302.2-201ENSMUST00000215212 268 ntBASIC26.11■■□□□ 1.77
Shroom2A2ALU4 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Shroom2A2ALU4 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Shroom2A2ALU4 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Shroom2A2ALU4 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Shroom2A2ALU4 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC26.11■■□□□ 1.77
Shroom2A2ALU4 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
Shroom2A2ALU4 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Shroom2A2ALU4 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
Shroom2A2ALU4 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Shroom2A2ALU4 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC26.11■■□□□ 1.77
Shroom2A2ALU4 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC26.11■■□□□ 1.77
Shroom2A2ALU4 Gm18889-201ENSMUST00000174284 929 ntBASIC26.11■■□□□ 1.77
Shroom2A2ALU4 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
Shroom2A2ALU4 Gm37153-201ENSMUST00000193637 231 ntBASIC26.11■■□□□ 1.77
Shroom2A2ALU4 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
Shroom2A2ALU4 AC132467.2-202ENSMUST00000227726 559 ntBASIC26.11■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms