Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IsxA1A546 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.51■□□□□ 0.07
IsxA1A546 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IsxA1A546 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IsxA1A546 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
IsxA1A546 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
IsxA1A546 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IsxA1A546 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IsxA1A546 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC15.51■□□□□ 0.07
IsxA1A546 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC15.51■□□□□ 0.07
IsxA1A546 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
IsxA1A546 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC15.51■□□□□ 0.07
IsxA1A546 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
IsxA1A546 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IsxA1A546 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IsxA1A546 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IsxA1A546 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
IsxA1A546 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IsxA1A546 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
IsxA1A546 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IsxA1A546 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
IsxA1A546 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
IsxA1A546 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IsxA1A546 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
IsxA1A546 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
IsxA1A546 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
IsxA1A546 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IsxA1A546 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
IsxA1A546 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IsxA1A546 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IsxA1A546 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
IsxA1A546 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
IsxA1A546 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC15.5■□□□□ 0.07
IsxA1A546 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
IsxA1A546 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IsxA1A546 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
IsxA1A546 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
IsxA1A546 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
IsxA1A546 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
IsxA1A546 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
IsxA1A546 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.5■□□□□ 0.07
IsxA1A546 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.5■□□□□ 0.07
IsxA1A546 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IsxA1A546 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
IsxA1A546 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
IsxA1A546 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.5■□□□□ 0.07
IsxA1A546 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
IsxA1A546 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IsxA1A546 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IsxA1A546 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.49■□□□□ 0.07
IsxA1A546 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.49■□□□□ 0.07
IsxA1A546 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.49■□□□□ 0.07
IsxA1A546 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
IsxA1A546 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IsxA1A546 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
IsxA1A546 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IsxA1A546 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IsxA1A546 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.49■□□□□ 0.07
IsxA1A546 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
IsxA1A546 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
IsxA1A546 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
IsxA1A546 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
IsxA1A546 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IsxA1A546 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.49■□□□□ 0.07
IsxA1A546 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
IsxA1A546 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IsxA1A546 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IsxA1A546 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
IsxA1A546 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
IsxA1A546 Asic1-205ENSMUST00000228185 1818 ntBASIC15.49■□□□□ 0.07
IsxA1A546 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
IsxA1A546 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.49■□□□□ 0.07
IsxA1A546 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
IsxA1A546 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IsxA1A546 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
IsxA1A546 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IsxA1A546 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
IsxA1A546 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IsxA1A546 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.48■□□□□ 0.07
IsxA1A546 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IsxA1A546 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IsxA1A546 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.48■□□□□ 0.07
IsxA1A546 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IsxA1A546 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IsxA1A546 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IsxA1A546 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
IsxA1A546 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IsxA1A546 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
IsxA1A546 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IsxA1A546 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
IsxA1A546 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.48■□□□□ 0.07
IsxA1A546 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.48■□□□□ 0.07
IsxA1A546 Gm38285-201ENSMUST00000192928 922 ntBASIC15.48■□□□□ 0.07
IsxA1A546 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.48■□□□□ 0.07
IsxA1A546 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC15.48■□□□□ 0.07
IsxA1A546 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IsxA1A546 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
IsxA1A546 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
IsxA1A546 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IsxA1A546 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms