Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trav12-1A0N8R1 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12-1A0N8R1 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trav12-1A0N8R1 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12-1A0N8R1 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12-1A0N8R1 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12-1A0N8R1 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12-1A0N8R1 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12-1A0N8R1 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trav12-1A0N8R1 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12-1A0N8R1 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12-1A0N8R1 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav12-1A0N8R1 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav12-1A0N8R1 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12-1A0N8R1 Gm38027-201ENSMUST00000192315 235 ntBASIC13.9□□□□□ -0.18
Trav12-1A0N8R1 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav12-1A0N8R1 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12-1A0N8R1 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav12-1A0N8R1 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12-1A0N8R1 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12-1A0N8R1 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav12-1A0N8R1 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12-1A0N8R1 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12-1A0N8R1 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.9□□□□□ -0.18
Trav12-1A0N8R1 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12-1A0N8R1 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Trav12-1A0N8R1 Gm7712-202ENSMUST00000222331 1510 ntBASIC13.9□□□□□ -0.19
Trav12-1A0N8R1 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trav12-1A0N8R1 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trav12-1A0N8R1 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trav12-1A0N8R1 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trav12-1A0N8R1 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12-1A0N8R1 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12-1A0N8R1 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav12-1A0N8R1 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12-1A0N8R1 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12-1A0N8R1 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12-1A0N8R1 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12-1A0N8R1 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12-1A0N8R1 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Trav12-1A0N8R1 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12-1A0N8R1 Gm12085-201ENSMUST00000119263 940 ntBASIC13.89□□□□□ -0.19
Trav12-1A0N8R1 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12-1A0N8R1 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12-1A0N8R1 Gm10698-201ENSMUST00000182663 604 ntBASIC13.89□□□□□ -0.19
Trav12-1A0N8R1 Gm5297-201ENSMUST00000198555 1171 ntBASIC13.89□□□□□ -0.19
Trav12-1A0N8R1 AC135637.1-201ENSMUST00000227750 365 ntBASIC13.89□□□□□ -0.19
Trav12-1A0N8R1 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12-1A0N8R1 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12-1A0N8R1 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.89□□□□□ -0.19
Trav12-1A0N8R1 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12-1A0N8R1 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12-1A0N8R1 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12-1A0N8R1 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12-1A0N8R1 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12-1A0N8R1 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12-1A0N8R1 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12-1A0N8R1 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12-1A0N8R1 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12-1A0N8R1 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12-1A0N8R1 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12-1A0N8R1 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12-1A0N8R1 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12-1A0N8R1 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12-1A0N8R1 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12-1A0N8R1 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12-1A0N8R1 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav12-1A0N8R1 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Trav12-1A0N8R1 Gm18958-201ENSMUST00000174258 762 ntBASIC13.88□□□□□ -0.19
Trav12-1A0N8R1 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC13.88□□□□□ -0.19
Trav12-1A0N8R1 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12-1A0N8R1 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav12-1A0N8R1 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12-1A0N8R1 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12-1A0N8R1 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Trav12-1A0N8R1 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12-1A0N8R1 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12-1A0N8R1 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12-1A0N8R1 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12-1A0N8R1 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12-1A0N8R1 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12-1A0N8R1 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav12-1A0N8R1 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12-1A0N8R1 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12-1A0N8R1 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12-1A0N8R1 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12-1A0N8R1 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12-1A0N8R1 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12-1A0N8R1 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12-1A0N8R1 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC13.87□□□□□ -0.19
Trav12-1A0N8R1 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC13.87□□□□□ -0.19
Trav12-1A0N8R1 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.87□□□□□ -0.19
Trav12-1A0N8R1 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav12-1A0N8R1 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12-1A0N8R1 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12-1A0N8R1 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav12-1A0N8R1 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12-1A0N8R1 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12-1A0N8R1 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12-1A0N8R1 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms