Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc112A0AUP1 Timm23-208ENSMUST00000226683 750 ntBASIC19.01■□□□□ 0.63
Ccdc112A0AUP1 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Ccdc112A0AUP1 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc112A0AUP1 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Ccdc112A0AUP1 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Ccdc112A0AUP1 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc112A0AUP1 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc112A0AUP1 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.01■□□□□ 0.63
Ccdc112A0AUP1 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc112A0AUP1 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc112A0AUP1 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc112A0AUP1 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc112A0AUP1 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc112A0AUP1 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Ccdc112A0AUP1 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Ccdc112A0AUP1 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ccdc112A0AUP1 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ccdc112A0AUP1 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc112A0AUP1 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc112A0AUP1 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ccdc112A0AUP1 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc112A0AUP1 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc112A0AUP1 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ccdc112A0AUP1 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ccdc112A0AUP1 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc112A0AUP1 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc112A0AUP1 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Ccdc112A0AUP1 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc112A0AUP1 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc112A0AUP1 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc112A0AUP1 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc112A0AUP1 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc112A0AUP1 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc112A0AUP1 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ccdc112A0AUP1 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc112A0AUP1 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc112A0AUP1 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Ccdc112A0AUP1 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc112A0AUP1 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19■□□□□ 0.63
Ccdc112A0AUP1 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.99■□□□□ 0.63
Ccdc112A0AUP1 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc112A0AUP1 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc112A0AUP1 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc112A0AUP1 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.99■□□□□ 0.63
Ccdc112A0AUP1 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc112A0AUP1 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc112A0AUP1 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc112A0AUP1 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.99■□□□□ 0.63
Ccdc112A0AUP1 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc112A0AUP1 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc112A0AUP1 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc112A0AUP1 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc112A0AUP1 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc112A0AUP1 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.99■□□□□ 0.63
Ccdc112A0AUP1 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc112A0AUP1 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Ccdc112A0AUP1 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc112A0AUP1 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc112A0AUP1 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc112A0AUP1 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
Ccdc112A0AUP1 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc112A0AUP1 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc112A0AUP1 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc112A0AUP1 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc112A0AUP1 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc112A0AUP1 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc112A0AUP1 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc112A0AUP1 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc112A0AUP1 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc112A0AUP1 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.98■□□□□ 0.63
Ccdc112A0AUP1 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Ccdc112A0AUP1 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.98■□□□□ 0.63
Ccdc112A0AUP1 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Ccdc112A0AUP1 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Ccdc112A0AUP1 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc112A0AUP1 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Ccdc112A0AUP1 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc112A0AUP1 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Ccdc112A0AUP1 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc112A0AUP1 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc112A0AUP1 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc112A0AUP1 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc112A0AUP1 Gm13168-201ENSMUST00000121771 632 ntBASIC18.97■□□□□ 0.63
Ccdc112A0AUP1 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Ccdc112A0AUP1 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc112A0AUP1 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.97■□□□□ 0.63
Ccdc112A0AUP1 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.97■□□□□ 0.63
Ccdc112A0AUP1 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc112A0AUP1 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc112A0AUP1 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc112A0AUP1 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.97■□□□□ 0.63
Ccdc112A0AUP1 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc112A0AUP1 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc112A0AUP1 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc112A0AUP1 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc112A0AUP1 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc112A0AUP1 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc112A0AUP1 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc112A0AUP1 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms