Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trbv13-2A0A140T8N6 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-2A0A140T8N6 AC154855.1-201ENSMUST00000227353 1458 ntBASIC11.6□□□□□ -0.55
Trbv13-2A0A140T8N6 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC11.6□□□□□ -0.55
Trbv13-2A0A140T8N6 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC11.6□□□□□ -0.55
Trbv13-2A0A140T8N6 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC11.6□□□□□ -0.55
Trbv13-2A0A140T8N6 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-2A0A140T8N6 Gm43799-201ENSMUST00000201845 579 ntBASIC11.6□□□□□ -0.55
Trbv13-2A0A140T8N6 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-2A0A140T8N6 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC11.6□□□□□ -0.55
Trbv13-2A0A140T8N6 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-2A0A140T8N6 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-2A0A140T8N6 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-2A0A140T8N6 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-2A0A140T8N6 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-2A0A140T8N6 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Trbv13-2A0A140T8N6 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC11.6□□□□□ -0.55
Trbv13-2A0A140T8N6 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-2A0A140T8N6 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Trbv13-2A0A140T8N6 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-2A0A140T8N6 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC11.6□□□□□ -0.55
Trbv13-2A0A140T8N6 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trbv13-2A0A140T8N6 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-2A0A140T8N6 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-2A0A140T8N6 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-2A0A140T8N6 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-2A0A140T8N6 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-2A0A140T8N6 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-2A0A140T8N6 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-2A0A140T8N6 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trbv13-2A0A140T8N6 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-2A0A140T8N6 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-2A0A140T8N6 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trbv13-2A0A140T8N6 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-2A0A140T8N6 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Trbv13-2A0A140T8N6 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-2A0A140T8N6 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-2A0A140T8N6 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-2A0A140T8N6 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-2A0A140T8N6 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trbv13-2A0A140T8N6 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-2A0A140T8N6 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-2A0A140T8N6 Gm16061-201ENSMUST00000122167 857 ntBASIC11.59□□□□□ -0.55
Trbv13-2A0A140T8N6 Gm13474-201ENSMUST00000122466 815 ntBASIC11.59□□□□□ -0.55
Trbv13-2A0A140T8N6 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC11.59□□□□□ -0.55
Trbv13-2A0A140T8N6 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-2A0A140T8N6 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-2A0A140T8N6 Gm7889-201ENSMUST00000185591 958 ntBASIC11.59□□□□□ -0.55
Trbv13-2A0A140T8N6 Gm7370-201ENSMUST00000219471 767 ntBASIC11.59□□□□□ -0.55
Trbv13-2A0A140T8N6 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-2A0A140T8N6 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-2A0A140T8N6 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-2A0A140T8N6 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-2A0A140T8N6 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-2A0A140T8N6 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-2A0A140T8N6 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-2A0A140T8N6 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-2A0A140T8N6 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-2A0A140T8N6 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-2A0A140T8N6 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-2A0A140T8N6 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-2A0A140T8N6 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trbv13-2A0A140T8N6 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv13-2A0A140T8N6 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trbv13-2A0A140T8N6 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv13-2A0A140T8N6 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv13-2A0A140T8N6 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv13-2A0A140T8N6 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv13-2A0A140T8N6 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trbv13-2A0A140T8N6 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv13-2A0A140T8N6 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC11.58□□□□□ -0.56
Trbv13-2A0A140T8N6 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv13-2A0A140T8N6 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv13-2A0A140T8N6 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv13-2A0A140T8N6 AC153881.2-201ENSMUST00000214877 204 ntBASIC11.58□□□□□ -0.56
Trbv13-2A0A140T8N6 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv13-2A0A140T8N6 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv13-2A0A140T8N6 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trbv13-2A0A140T8N6 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv13-2A0A140T8N6 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC11.58□□□□□ -0.56
Trbv13-2A0A140T8N6 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv13-2A0A140T8N6 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv13-2A0A140T8N6 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC11.58□□□□□ -0.56
Trbv13-2A0A140T8N6 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv13-2A0A140T8N6 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv13-2A0A140T8N6 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv13-2A0A140T8N6 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv13-2A0A140T8N6 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv13-2A0A140T8N6 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv13-2A0A140T8N6 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv13-2A0A140T8N6 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv13-2A0A140T8N6 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv13-2A0A140T8N6 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC11.57□□□□□ -0.56
Trbv13-2A0A140T8N6 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC11.57□□□□□ -0.56
Trbv13-2A0A140T8N6 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv13-2A0A140T8N6 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Trbv13-2A0A140T8N6 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv13-2A0A140T8N6 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Trbv13-2A0A140T8N6 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC11.57□□□□□ -0.56
Trbv13-2A0A140T8N6 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms