Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Igkv1-88A0A140T8N1 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Igkv1-88A0A140T8N1 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Igkv1-88A0A140T8N1 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Igkv1-88A0A140T8N1 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC11.02□□□□□ -0.65
Igkv1-88A0A140T8N1 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Igkv1-88A0A140T8N1 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Igkv1-88A0A140T8N1 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Igkv1-88A0A140T8N1 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Igkv1-88A0A140T8N1 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Igkv1-88A0A140T8N1 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Igkv1-88A0A140T8N1 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Igkv1-88A0A140T8N1 Gm2559-201ENSMUST00000201323 363 ntBASIC11.02□□□□□ -0.65
Igkv1-88A0A140T8N1 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC11.02□□□□□ -0.65
Igkv1-88A0A140T8N1 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Igkv1-88A0A140T8N1 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Igkv1-88A0A140T8N1 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Igkv1-88A0A140T8N1 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Igkv1-88A0A140T8N1 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Igkv1-88A0A140T8N1 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Igkv1-88A0A140T8N1 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Igkv1-88A0A140T8N1 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Igkv1-88A0A140T8N1 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC11.02□□□□□ -0.65
Igkv1-88A0A140T8N1 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Igkv1-88A0A140T8N1 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Igkv1-88A0A140T8N1 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Igkv1-88A0A140T8N1 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Igkv1-88A0A140T8N1 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Igkv1-88A0A140T8N1 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Igkv1-88A0A140T8N1 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Igkv1-88A0A140T8N1 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Igkv1-88A0A140T8N1 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Igkv1-88A0A140T8N1 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Igkv1-88A0A140T8N1 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC11.01□□□□□ -0.65
Igkv1-88A0A140T8N1 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Igkv1-88A0A140T8N1 Gm13148-201ENSMUST00000118892 745 ntBASIC11.01□□□□□ -0.65
Igkv1-88A0A140T8N1 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC11.01□□□□□ -0.65
Igkv1-88A0A140T8N1 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC11.01□□□□□ -0.65
Igkv1-88A0A140T8N1 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC11.01□□□□□ -0.65
Igkv1-88A0A140T8N1 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Igkv1-88A0A140T8N1 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Igkv1-88A0A140T8N1 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Igkv1-88A0A140T8N1 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC11.01□□□□□ -0.65
Igkv1-88A0A140T8N1 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Igkv1-88A0A140T8N1 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Igkv1-88A0A140T8N1 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Igkv1-88A0A140T8N1 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC11.01□□□□□ -0.65
Igkv1-88A0A140T8N1 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Igkv1-88A0A140T8N1 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Igkv1-88A0A140T8N1 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Igkv1-88A0A140T8N1 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Igkv1-88A0A140T8N1 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Igkv1-88A0A140T8N1 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC11□□□□□ -0.65
Igkv1-88A0A140T8N1 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv1-88A0A140T8N1 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Igkv1-88A0A140T8N1 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv1-88A0A140T8N1 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv1-88A0A140T8N1 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC11□□□□□ -0.65
Igkv1-88A0A140T8N1 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv1-88A0A140T8N1 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Igkv1-88A0A140T8N1 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv1-88A0A140T8N1 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv1-88A0A140T8N1 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv1-88A0A140T8N1 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv1-88A0A140T8N1 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv1-88A0A140T8N1 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv1-88A0A140T8N1 Sybu-209ENSMUST00000228639 4113 ntBASIC11□□□□□ -0.65
Igkv1-88A0A140T8N1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC11□□□□□ -0.65
Igkv1-88A0A140T8N1 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv1-88A0A140T8N1 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv1-88A0A140T8N1 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC11□□□□□ -0.65
Igkv1-88A0A140T8N1 Gm11643-201ENSMUST00000119578 864 ntBASIC11□□□□□ -0.65
Igkv1-88A0A140T8N1 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC11□□□□□ -0.65
Igkv1-88A0A140T8N1 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC11□□□□□ -0.65
Igkv1-88A0A140T8N1 Gm6576-201ENSMUST00000169678 883 ntBASIC11□□□□□ -0.65
Igkv1-88A0A140T8N1 Mir6349-201ENSMUST00000184059 97 ntBASIC11□□□□□ -0.65
Igkv1-88A0A140T8N1 Gm10138-203ENSMUST00000206952 366 ntBASIC11□□□□□ -0.65
Igkv1-88A0A140T8N1 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Igkv1-88A0A140T8N1 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv1-88A0A140T8N1 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Igkv1-88A0A140T8N1 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv1-88A0A140T8N1 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11□□□□□ -0.65
Igkv1-88A0A140T8N1 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv1-88A0A140T8N1 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv1-88A0A140T8N1 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv1-88A0A140T8N1 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv1-88A0A140T8N1 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv1-88A0A140T8N1 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv1-88A0A140T8N1 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv1-88A0A140T8N1 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv1-88A0A140T8N1 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv1-88A0A140T8N1 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC11□□□□□ -0.65
Igkv1-88A0A140T8N1 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv1-88A0A140T8N1 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv1-88A0A140T8N1 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv1-88A0A140T8N1 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv1-88A0A140T8N1 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Igkv1-88A0A140T8N1 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv1-88A0A140T8N1 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv1-88A0A140T8N1 Gm10654-201ENSMUST00000098653 1633 ntBASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms