Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cfap99A0A140LIX9 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cfap99A0A140LIX9 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cfap99A0A140LIX9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cfap99A0A140LIX9 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cfap99A0A140LIX9 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cfap99A0A140LIX9 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Cfap99A0A140LIX9 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cfap99A0A140LIX9 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cfap99A0A140LIX9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cfap99A0A140LIX9 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cfap99A0A140LIX9 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cfap99A0A140LIX9 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cfap99A0A140LIX9 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Cfap99A0A140LIX9 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cfap99A0A140LIX9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Cfap99A0A140LIX9 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cfap99A0A140LIX9 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cfap99A0A140LIX9 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cfap99A0A140LIX9 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cfap99A0A140LIX9 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cfap99A0A140LIX9 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cfap99A0A140LIX9 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.88■□□□□ 0.77
Cfap99A0A140LIX9 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.88■□□□□ 0.77
Cfap99A0A140LIX9 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.88■□□□□ 0.77
Cfap99A0A140LIX9 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC19.88■□□□□ 0.77
Cfap99A0A140LIX9 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cfap99A0A140LIX9 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cfap99A0A140LIX9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cfap99A0A140LIX9 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cfap99A0A140LIX9 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.88■□□□□ 0.77
Cfap99A0A140LIX9 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Cfap99A0A140LIX9 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.87■□□□□ 0.77
Cfap99A0A140LIX9 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cfap99A0A140LIX9 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cfap99A0A140LIX9 Gm44771-201ENSMUST00000206975 626 ntBASIC19.87■□□□□ 0.77
Cfap99A0A140LIX9 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cfap99A0A140LIX9 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cfap99A0A140LIX9 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cfap99A0A140LIX9 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cfap99A0A140LIX9 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cfap99A0A140LIX9 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cfap99A0A140LIX9 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cfap99A0A140LIX9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Cfap99A0A140LIX9 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cfap99A0A140LIX9 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cfap99A0A140LIX9 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cfap99A0A140LIX9 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cfap99A0A140LIX9 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cfap99A0A140LIX9 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cfap99A0A140LIX9 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Cfap99A0A140LIX9 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cfap99A0A140LIX9 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.86■□□□□ 0.77
Cfap99A0A140LIX9 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cfap99A0A140LIX9 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Cfap99A0A140LIX9 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cfap99A0A140LIX9 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cfap99A0A140LIX9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cfap99A0A140LIX9 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cfap99A0A140LIX9 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cfap99A0A140LIX9 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
Cfap99A0A140LIX9 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cfap99A0A140LIX9 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cfap99A0A140LIX9 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cfap99A0A140LIX9 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
Cfap99A0A140LIX9 Gm24589-201ENSMUST00000116692 94 ntBASIC19.85■□□□□ 0.77
Cfap99A0A140LIX9 Gm18115-201ENSMUST00000221209 621 ntBASIC19.85■□□□□ 0.77
Cfap99A0A140LIX9 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Cfap99A0A140LIX9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cfap99A0A140LIX9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cfap99A0A140LIX9 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cfap99A0A140LIX9 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cfap99A0A140LIX9 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cfap99A0A140LIX9 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cfap99A0A140LIX9 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cfap99A0A140LIX9 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cfap99A0A140LIX9 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cfap99A0A140LIX9 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.84■□□□□ 0.77
Cfap99A0A140LIX9 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.84■□□□□ 0.77
Cfap99A0A140LIX9 Spr-ps1-201ENSMUST00000089584 605 ntBASIC19.84■□□□□ 0.77
Cfap99A0A140LIX9 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cfap99A0A140LIX9 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cfap99A0A140LIX9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cfap99A0A140LIX9 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cfap99A0A140LIX9 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cfap99A0A140LIX9 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cfap99A0A140LIX9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Cfap99A0A140LIX9 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
Cfap99A0A140LIX9 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cfap99A0A140LIX9 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cfap99A0A140LIX9 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC19.83■□□□□ 0.77
Cfap99A0A140LIX9 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cfap99A0A140LIX9 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Cfap99A0A140LIX9 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cfap99A0A140LIX9 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Cfap99A0A140LIX9 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Cfap99A0A140LIX9 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cfap99A0A140LIX9 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.82■□□□□ 0.76
Cfap99A0A140LIX9 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Cfap99A0A140LIX9 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms