Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Atg4a-psA0A0G2JFS9 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC20.23■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.23■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Gm10013-201ENSMUST00000106074 672 ntBASIC20.22■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC20.22■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC20.22■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC20.22■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC20.21■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC20.21■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atg4a-psA0A0G2JFS9 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atg4a-psA0A0G2JFS9 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Atg4a-psA0A0G2JFS9 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atg4a-psA0A0G2JFS9 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Atg4a-psA0A0G2JFS9 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Atg4a-psA0A0G2JFS9 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atg4a-psA0A0G2JFS9 Hivep3-201ENSMUST00000084306 2973 ntBASIC20.2■□□□□ 0.82
Atg4a-psA0A0G2JFS9 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atg4a-psA0A0G2JFS9 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atg4a-psA0A0G2JFS9 Gm11355-201ENSMUST00000121120 306 ntBASIC20.2■□□□□ 0.82
Atg4a-psA0A0G2JFS9 Gm11860-201ENSMUST00000122346 1010 ntBASIC20.2■□□□□ 0.82
Atg4a-psA0A0G2JFS9 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Atg4a-psA0A0G2JFS9 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC20.2■□□□□ 0.82
Atg4a-psA0A0G2JFS9 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC20.2■□□□□ 0.82
Atg4a-psA0A0G2JFS9 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Atg4a-psA0A0G2JFS9 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Atg4a-psA0A0G2JFS9 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.2■□□□□ 0.82
Atg4a-psA0A0G2JFS9 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atg4a-psA0A0G2JFS9 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Atg4a-psA0A0G2JFS9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Atg4a-psA0A0G2JFS9 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC20.2■□□□□ 0.82
Atg4a-psA0A0G2JFS9 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Atg4a-psA0A0G2JFS9 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atg4a-psA0A0G2JFS9 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atg4a-psA0A0G2JFS9 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atg4a-psA0A0G2JFS9 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atg4a-psA0A0G2JFS9 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atg4a-psA0A0G2JFS9 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atg4a-psA0A0G2JFS9 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Atg4a-psA0A0G2JFS9 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atg4a-psA0A0G2JFS9 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atg4a-psA0A0G2JFS9 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atg4a-psA0A0G2JFS9 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Atg4a-psA0A0G2JFS9 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Atg4a-psA0A0G2JFS9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Atg4a-psA0A0G2JFS9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atg4a-psA0A0G2JFS9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atg4a-psA0A0G2JFS9 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC20.19■□□□□ 0.82
Atg4a-psA0A0G2JFS9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atg4a-psA0A0G2JFS9 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atg4a-psA0A0G2JFS9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Atg4a-psA0A0G2JFS9 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Atg4a-psA0A0G2JFS9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atg4a-psA0A0G2JFS9 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms