Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9-4A0A0B4J1K2 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9-4A0A0B4J1K2 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9-4A0A0B4J1K2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9-4A0A0B4J1K2 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trav9-4A0A0B4J1K2 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9-4A0A0B4J1K2 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9-4A0A0B4J1K2 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9-4A0A0B4J1K2 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav9-4A0A0B4J1K2 Gm29994-201ENSMUST00000195495 1193 ntBASIC12.5□□□□□ -0.41
Trav9-4A0A0B4J1K2 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9-4A0A0B4J1K2 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9-4A0A0B4J1K2 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9-4A0A0B4J1K2 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.5□□□□□ -0.41
Trav9-4A0A0B4J1K2 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9-4A0A0B4J1K2 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9-4A0A0B4J1K2 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9-4A0A0B4J1K2 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9-4A0A0B4J1K2 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9-4A0A0B4J1K2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9-4A0A0B4J1K2 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9-4A0A0B4J1K2 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9-4A0A0B4J1K2 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9-4A0A0B4J1K2 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9-4A0A0B4J1K2 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9-4A0A0B4J1K2 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav9-4A0A0B4J1K2 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9-4A0A0B4J1K2 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9-4A0A0B4J1K2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Trav9-4A0A0B4J1K2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9-4A0A0B4J1K2 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9-4A0A0B4J1K2 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trav9-4A0A0B4J1K2 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9-4A0A0B4J1K2 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav9-4A0A0B4J1K2 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9-4A0A0B4J1K2 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trav9-4A0A0B4J1K2 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9-4A0A0B4J1K2 Gm13836-201ENSMUST00000121159 501 ntBASIC12.49□□□□□ -0.41
Trav9-4A0A0B4J1K2 Gm10231-201ENSMUST00000181584 441 ntBASIC12.49□□□□□ -0.41
Trav9-4A0A0B4J1K2 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9-4A0A0B4J1K2 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC12.49□□□□□ -0.41
Trav9-4A0A0B4J1K2 Gm10175-202ENSMUST00000208752 441 ntBASIC12.49□□□□□ -0.41
Trav9-4A0A0B4J1K2 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav9-4A0A0B4J1K2 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.49□□□□□ -0.41
Trav9-4A0A0B4J1K2 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9-4A0A0B4J1K2 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9-4A0A0B4J1K2 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9-4A0A0B4J1K2 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9-4A0A0B4J1K2 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9-4A0A0B4J1K2 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trav9-4A0A0B4J1K2 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9-4A0A0B4J1K2 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav9-4A0A0B4J1K2 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9-4A0A0B4J1K2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9-4A0A0B4J1K2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9-4A0A0B4J1K2 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav9-4A0A0B4J1K2 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9-4A0A0B4J1K2 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9-4A0A0B4J1K2 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9-4A0A0B4J1K2 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9-4A0A0B4J1K2 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9-4A0A0B4J1K2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9-4A0A0B4J1K2 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9-4A0A0B4J1K2 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9-4A0A0B4J1K2 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9-4A0A0B4J1K2 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9-4A0A0B4J1K2 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9-4A0A0B4J1K2 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9-4A0A0B4J1K2 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav9-4A0A0B4J1K2 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9-4A0A0B4J1K2 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav9-4A0A0B4J1K2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9-4A0A0B4J1K2 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav9-4A0A0B4J1K2 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav9-4A0A0B4J1K2 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav9-4A0A0B4J1K2 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9-4A0A0B4J1K2 Gm22697-201ENSMUST00000175194 63 ntBASIC12.48□□□□□ -0.41
Trav9-4A0A0B4J1K2 Gm18101-201ENSMUST00000215769 548 ntBASIC12.48□□□□□ -0.41
Trav9-4A0A0B4J1K2 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9-4A0A0B4J1K2 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9-4A0A0B4J1K2 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9-4A0A0B4J1K2 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9-4A0A0B4J1K2 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9-4A0A0B4J1K2 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9-4A0A0B4J1K2 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9-4A0A0B4J1K2 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9-4A0A0B4J1K2 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trav9-4A0A0B4J1K2 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav9-4A0A0B4J1K2 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9-4A0A0B4J1K2 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9-4A0A0B4J1K2 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-4A0A0B4J1K2 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trav9-4A0A0B4J1K2 Actl10-202ENSMUST00000226583 1501 ntBASIC12.47□□□□□ -0.41
Trav9-4A0A0B4J1K2 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-4A0A0B4J1K2 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav9-4A0A0B4J1K2 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-4A0A0B4J1K2 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-4A0A0B4J1K2 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-4A0A0B4J1K2 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-4A0A0B4J1K2 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms