Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.91■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.91■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Gm34391-201ENSMUST00000203706 907 ntBASIC16.91■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.91■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.9■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Rprl3-201ENSMUST00000157400 290 ntBASIC16.9■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.9■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Igkv5-43A0A0B4J1J2 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.89■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.89■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.89■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Gm27741-201ENSMUST00000185060 237 ntBASIC16.89■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.88■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Igkv5-43A0A0B4J1J2 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.88■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Igkv5-43A0A0B4J1J2 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.88■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms