Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv16A0A0B4J1H3 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trbv16A0A0B4J1H3 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv16A0A0B4J1H3 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv16A0A0B4J1H3 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trbv16A0A0B4J1H3 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trbv16A0A0B4J1H3 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv16A0A0B4J1H3 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Trbv16A0A0B4J1H3 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv16A0A0B4J1H3 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv16A0A0B4J1H3 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv16A0A0B4J1H3 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv16A0A0B4J1H3 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv16A0A0B4J1H3 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv16A0A0B4J1H3 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv16A0A0B4J1H3 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv16A0A0B4J1H3 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv16A0A0B4J1H3 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv16A0A0B4J1H3 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC12.05□□□□□ -0.48
Trbv16A0A0B4J1H3 Gm18958-201ENSMUST00000174258 762 ntBASIC12.05□□□□□ -0.48
Trbv16A0A0B4J1H3 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC12.05□□□□□ -0.48
Trbv16A0A0B4J1H3 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv16A0A0B4J1H3 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv16A0A0B4J1H3 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv16A0A0B4J1H3 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv16A0A0B4J1H3 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv16A0A0B4J1H3 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv16A0A0B4J1H3 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv16A0A0B4J1H3 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv16A0A0B4J1H3 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv16A0A0B4J1H3 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.05□□□□□ -0.48
Trbv16A0A0B4J1H3 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trbv16A0A0B4J1H3 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Trbv16A0A0B4J1H3 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv16A0A0B4J1H3 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv16A0A0B4J1H3 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trbv16A0A0B4J1H3 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv16A0A0B4J1H3 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv16A0A0B4J1H3 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trbv16A0A0B4J1H3 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trbv16A0A0B4J1H3 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC12.04□□□□□ -0.48
Trbv16A0A0B4J1H3 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv16A0A0B4J1H3 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv16A0A0B4J1H3 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv16A0A0B4J1H3 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv16A0A0B4J1H3 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trbv16A0A0B4J1H3 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC12.04□□□□□ -0.48
Trbv16A0A0B4J1H3 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv16A0A0B4J1H3 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv16A0A0B4J1H3 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trbv16A0A0B4J1H3 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv16A0A0B4J1H3 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv16A0A0B4J1H3 Gm12441-201ENSMUST00000121806 588 ntBASIC12.04□□□□□ -0.48
Trbv16A0A0B4J1H3 Gm15378-201ENSMUST00000121894 207 ntBASIC12.04□□□□□ -0.48
Trbv16A0A0B4J1H3 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC12.04□□□□□ -0.48
Trbv16A0A0B4J1H3 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trbv16A0A0B4J1H3 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC12.04□□□□□ -0.48
Trbv16A0A0B4J1H3 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv16A0A0B4J1H3 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv16A0A0B4J1H3 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv16A0A0B4J1H3 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC12.04□□□□□ -0.48
Trbv16A0A0B4J1H3 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv16A0A0B4J1H3 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv16A0A0B4J1H3 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv16A0A0B4J1H3 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv16A0A0B4J1H3 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trbv16A0A0B4J1H3 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC12.04□□□□□ -0.48
Trbv16A0A0B4J1H3 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv16A0A0B4J1H3 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv16A0A0B4J1H3 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv16A0A0B4J1H3 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv16A0A0B4J1H3 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 Trmt13-210ENSMUST00000198454 880 ntBASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 Gm5297-201ENSMUST00000198555 1171 ntBASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms