Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.68□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.68□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.68□□□□□ -0.06
Trbv12-1A0A0B4J1H0 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Mir770-201ENSMUST00000103252 94 ntBASIC14.67□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Gm36967-201ENSMUST00000193814 266 ntBASIC14.67□□□□□ -0.06
Trbv12-1A0A0B4J1H0 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.67□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trbv12-1A0A0B4J1H0 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.67□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.67□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.67□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.66□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.66□□□□□ -0.06
Trbv12-1A0A0B4J1H0 AA414768-201ENSMUST00000121924 1257 ntBASIC14.66□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.66□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.66□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.66□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.66□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv12-1A0A0B4J1H0 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.66□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.66□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.66□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.65□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.65□□□□□ -0.06
Trbv12-1A0A0B4J1H0 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv12-1A0A0B4J1H0 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Trbv12-1A0A0B4J1H0 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv12-1A0A0B4J1H0 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv12-1A0A0B4J1H0 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trbv12-1A0A0B4J1H0 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv12-1A0A0B4J1H0 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv12-1A0A0B4J1H0 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
Trbv12-1A0A0B4J1H0 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv12-1A0A0B4J1H0 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv12-1A0A0B4J1H0 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv12-1A0A0B4J1H0 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv12-1A0A0B4J1H0 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv12-1A0A0B4J1H0 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv12-1A0A0B4J1H0 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.64□□□□□ -0.07
Trbv12-1A0A0B4J1H0 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv12-1A0A0B4J1H0 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.64□□□□□ -0.07
Trbv12-1A0A0B4J1H0 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv12-1A0A0B4J1H0 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms