Protein–RNA interactions for Protein: A0A0A6YY83

Pcdh7, Protocadherin 7, mousemouse

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh7A0A0A6YY83 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.14■□□□□ 0.34
Pcdh7A0A0A6YY83 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pcdh7A0A0A6YY83 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh7A0A0A6YY83 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Pcdh7A0A0A6YY83 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh7A0A0A6YY83 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.14■□□□□ 0.33
Pcdh7A0A0A6YY83 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.14■□□□□ 0.33
Pcdh7A0A0A6YY83 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
Pcdh7A0A0A6YY83 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Pcdh7A0A0A6YY83 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh7A0A0A6YY83 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh7A0A0A6YY83 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh7A0A0A6YY83 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh7A0A0A6YY83 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh7A0A0A6YY83 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh7A0A0A6YY83 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh7A0A0A6YY83 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
Pcdh7A0A0A6YY83 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh7A0A0A6YY83 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Pcdh7A0A0A6YY83 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Pcdh7A0A0A6YY83 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Pcdh7A0A0A6YY83 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdh7A0A0A6YY83 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh7A0A0A6YY83 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh7A0A0A6YY83 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh7A0A0A6YY83 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Pcdh7A0A0A6YY83 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh7A0A0A6YY83 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh7A0A0A6YY83 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Pcdh7A0A0A6YY83 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh7A0A0A6YY83 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh7A0A0A6YY83 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh7A0A0A6YY83 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh7A0A0A6YY83 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh7A0A0A6YY83 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh7A0A0A6YY83 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh7A0A0A6YY83 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh7A0A0A6YY83 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh7A0A0A6YY83 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh7A0A0A6YY83 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh7A0A0A6YY83 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Pcdh7A0A0A6YY83 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Pcdh7A0A0A6YY83 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh7A0A0A6YY83 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh7A0A0A6YY83 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.12■□□□□ 0.33
Pcdh7A0A0A6YY83 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdh7A0A0A6YY83 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh7A0A0A6YY83 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh7A0A0A6YY83 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh7A0A0A6YY83 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Pcdh7A0A0A6YY83 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh7A0A0A6YY83 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Pcdh7A0A0A6YY83 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh7A0A0A6YY83 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh7A0A0A6YY83 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh7A0A0A6YY83 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Pcdh7A0A0A6YY83 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh7A0A0A6YY83 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.11■□□□□ 0.33
Pcdh7A0A0A6YY83 Gm11355-201ENSMUST00000121120 306 ntBASIC17.11■□□□□ 0.33
Pcdh7A0A0A6YY83 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh7A0A0A6YY83 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Pcdh7A0A0A6YY83 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh7A0A0A6YY83 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.11■□□□□ 0.33
Pcdh7A0A0A6YY83 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh7A0A0A6YY83 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh7A0A0A6YY83 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh7A0A0A6YY83 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh7A0A0A6YY83 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Pcdh7A0A0A6YY83 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh7A0A0A6YY83 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh7A0A0A6YY83 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh7A0A0A6YY83 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh7A0A0A6YY83 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh7A0A0A6YY83 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh7A0A0A6YY83 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.1■□□□□ 0.33
Pcdh7A0A0A6YY83 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh7A0A0A6YY83 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh7A0A0A6YY83 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh7A0A0A6YY83 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Pcdh7A0A0A6YY83 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.1■□□□□ 0.33
Pcdh7A0A0A6YY83 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.1■□□□□ 0.33
Pcdh7A0A0A6YY83 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pcdh7A0A0A6YY83 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh7A0A0A6YY83 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.1■□□□□ 0.33
Pcdh7A0A0A6YY83 Gm37722-201ENSMUST00000193757 208 ntBASIC17.1■□□□□ 0.33
Pcdh7A0A0A6YY83 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.1■□□□□ 0.33
Pcdh7A0A0A6YY83 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh7A0A0A6YY83 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh7A0A0A6YY83 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh7A0A0A6YY83 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh7A0A0A6YY83 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh7A0A0A6YY83 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh7A0A0A6YY83 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcdh7A0A0A6YY83 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh7A0A0A6YY83 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh7A0A0A6YY83 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh7A0A0A6YY83 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh7A0A0A6YY83 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh7A0A0A6YY83 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Pcdh7A0A0A6YY83 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms