Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trbc1A0A0A6YWV4 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbc1A0A0A6YWV4 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbc1A0A0A6YWV4 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbc1A0A0A6YWV4 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbc1A0A0A6YWV4 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbc1A0A0A6YWV4 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbc1A0A0A6YWV4 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Trbc1A0A0A6YWV4 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trbc1A0A0A6YWV4 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trbc1A0A0A6YWV4 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.28■□□□□ 0.04
Trbc1A0A0A6YWV4 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.28■□□□□ 0.04
Trbc1A0A0A6YWV4 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Trbc1A0A0A6YWV4 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.28■□□□□ 0.04
Trbc1A0A0A6YWV4 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbc1A0A0A6YWV4 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbc1A0A0A6YWV4 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbc1A0A0A6YWV4 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbc1A0A0A6YWV4 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbc1A0A0A6YWV4 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.28■□□□□ 0.04
Trbc1A0A0A6YWV4 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trbc1A0A0A6YWV4 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.28■□□□□ 0.04
Trbc1A0A0A6YWV4 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbc1A0A0A6YWV4 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbc1A0A0A6YWV4 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbc1A0A0A6YWV4 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbc1A0A0A6YWV4 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trbc1A0A0A6YWV4 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Trbc1A0A0A6YWV4 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Trbc1A0A0A6YWV4 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbc1A0A0A6YWV4 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbc1A0A0A6YWV4 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbc1A0A0A6YWV4 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Trbc1A0A0A6YWV4 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbc1A0A0A6YWV4 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trbc1A0A0A6YWV4 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Trbc1A0A0A6YWV4 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbc1A0A0A6YWV4 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbc1A0A0A6YWV4 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trbc1A0A0A6YWV4 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trbc1A0A0A6YWV4 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbc1A0A0A6YWV4 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trbc1A0A0A6YWV4 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbc1A0A0A6YWV4 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbc1A0A0A6YWV4 Gm27389-201ENSMUST00000183622 195 ntBASIC15.27■□□□□ 0.04
Trbc1A0A0A6YWV4 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbc1A0A0A6YWV4 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.27■□□□□ 0.04
Trbc1A0A0A6YWV4 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trbc1A0A0A6YWV4 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbc1A0A0A6YWV4 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbc1A0A0A6YWV4 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbc1A0A0A6YWV4 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Trbc1A0A0A6YWV4 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbc1A0A0A6YWV4 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbc1A0A0A6YWV4 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbc1A0A0A6YWV4 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Trbc1A0A0A6YWV4 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbc1A0A0A6YWV4 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trbc1A0A0A6YWV4 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trbc1A0A0A6YWV4 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbc1A0A0A6YWV4 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Trbc1A0A0A6YWV4 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbc1A0A0A6YWV4 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbc1A0A0A6YWV4 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbc1A0A0A6YWV4 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trbc1A0A0A6YWV4 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbc1A0A0A6YWV4 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Trbc1A0A0A6YWV4 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trbc1A0A0A6YWV4 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trbc1A0A0A6YWV4 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbc1A0A0A6YWV4 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbc1A0A0A6YWV4 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbc1A0A0A6YWV4 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trbc1A0A0A6YWV4 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbc1A0A0A6YWV4 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbc1A0A0A6YWV4 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbc1A0A0A6YWV4 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbc1A0A0A6YWV4 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbc1A0A0A6YWV4 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbc1A0A0A6YWV4 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbc1A0A0A6YWV4 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trbc1A0A0A6YWV4 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbc1A0A0A6YWV4 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trbc1A0A0A6YWV4 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trbc1A0A0A6YWV4 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbc1A0A0A6YWV4 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbc1A0A0A6YWV4 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbc1A0A0A6YWV4 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trbc1A0A0A6YWV4 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbc1A0A0A6YWV4 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trbc1A0A0A6YWV4 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbc1A0A0A6YWV4 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trbc1A0A0A6YWV4 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trbc1A0A0A6YWV4 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trbc1A0A0A6YWV4 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trbc1A0A0A6YWV4 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbc1A0A0A6YWV4 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbc1A0A0A6YWV4 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Trbc1A0A0A6YWV4 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.24■□□□□ 0.03
Trbc1A0A0A6YWV4 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms