Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC13.48□□□□□ -0.25
Trav6d-5A0A075B6B9 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav6d-5A0A075B6B9 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6d-5A0A075B6B9 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav6d-5A0A075B6B9 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav6d-5A0A075B6B9 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6d-5A0A075B6B9 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6d-5A0A075B6B9 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6d-5A0A075B6B9 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6d-5A0A075B6B9 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav6d-5A0A075B6B9 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav6d-5A0A075B6B9 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6d-5A0A075B6B9 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav6d-5A0A075B6B9 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6d-5A0A075B6B9 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6d-5A0A075B6B9 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6d-5A0A075B6B9 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6d-5A0A075B6B9 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6d-5A0A075B6B9 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.47□□□□□ -0.25
Trav6d-5A0A075B6B9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6d-5A0A075B6B9 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav6d-5A0A075B6B9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav6d-5A0A075B6B9 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6d-5A0A075B6B9 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6d-5A0A075B6B9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav6d-5A0A075B6B9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Trav6d-5A0A075B6B9 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC13.47□□□□□ -0.25
Trav6d-5A0A075B6B9 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6d-5A0A075B6B9 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6d-5A0A075B6B9 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6d-5A0A075B6B9 Gm4968-201ENSMUST00000071458 858 ntBASIC13.47□□□□□ -0.25
Trav6d-5A0A075B6B9 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6d-5A0A075B6B9 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6d-5A0A075B6B9 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6d-5A0A075B6B9 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.47□□□□□ -0.25
Trav6d-5A0A075B6B9 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6d-5A0A075B6B9 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6d-5A0A075B6B9 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6d-5A0A075B6B9 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6d-5A0A075B6B9 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6d-5A0A075B6B9 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6d-5A0A075B6B9 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6d-5A0A075B6B9 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6d-5A0A075B6B9 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6d-5A0A075B6B9 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Trav6d-5A0A075B6B9 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6d-5A0A075B6B9 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6d-5A0A075B6B9 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trav6d-5A0A075B6B9 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6d-5A0A075B6B9 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Trav6d-5A0A075B6B9 Gm24841-201ENSMUST00000158676 357 ntBASIC13.46□□□□□ -0.25
Trav6d-5A0A075B6B9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.46□□□□□ -0.25
Trav6d-5A0A075B6B9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6d-5A0A075B6B9 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6d-5A0A075B6B9 Alkbh1-212ENSMUST00000185301 408 ntBASIC13.46□□□□□ -0.25
Trav6d-5A0A075B6B9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trav6d-5A0A075B6B9 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6d-5A0A075B6B9 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trav6d-5A0A075B6B9 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6d-5A0A075B6B9 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trav6d-5A0A075B6B9 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav6d-5A0A075B6B9 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6d-5A0A075B6B9 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6d-5A0A075B6B9 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6d-5A0A075B6B9 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Trav6d-5A0A075B6B9 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6d-5A0A075B6B9 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6d-5A0A075B6B9 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6d-5A0A075B6B9 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6d-5A0A075B6B9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trav6d-5A0A075B6B9 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6d-5A0A075B6B9 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6d-5A0A075B6B9 Gm13148-201ENSMUST00000118892 745 ntBASIC13.45□□□□□ -0.26
Trav6d-5A0A075B6B9 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6d-5A0A075B6B9 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6d-5A0A075B6B9 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6d-5A0A075B6B9 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6d-5A0A075B6B9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Trav6d-5A0A075B6B9 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6d-5A0A075B6B9 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6d-5A0A075B6B9 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6d-5A0A075B6B9 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav6d-5A0A075B6B9 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6d-5A0A075B6B9 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6d-5A0A075B6B9 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trav6d-5A0A075B6B9 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-5A0A075B6B9 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-5A0A075B6B9 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-5A0A075B6B9 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-5A0A075B6B9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
Trav6d-5A0A075B6B9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-5A0A075B6B9 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.44□□□□□ -0.26
Trav6d-5A0A075B6B9 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-5A0A075B6B9 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-5A0A075B6B9 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-5A0A075B6B9 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-5A0A075B6B9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-5A0A075B6B9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-5A0A075B6B9 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-5A0A075B6B9 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms