Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6n-6A0A075B6B2 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6n-6A0A075B6B2 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6n-6A0A075B6B2 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6n-6A0A075B6B2 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6n-6A0A075B6B2 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6n-6A0A075B6B2 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6n-6A0A075B6B2 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6n-6A0A075B6B2 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6n-6A0A075B6B2 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6n-6A0A075B6B2 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav6n-6A0A075B6B2 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Trav6n-6A0A075B6B2 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6n-6A0A075B6B2 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6n-6A0A075B6B2 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav6n-6A0A075B6B2 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6n-6A0A075B6B2 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6n-6A0A075B6B2 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trav6n-6A0A075B6B2 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6n-6A0A075B6B2 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6n-6A0A075B6B2 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6n-6A0A075B6B2 Gm8520-201ENSMUST00000186517 868 ntBASIC12.44□□□□□ -0.42
Trav6n-6A0A075B6B2 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6n-6A0A075B6B2 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trav6n-6A0A075B6B2 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6n-6A0A075B6B2 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6n-6A0A075B6B2 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6n-6A0A075B6B2 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6n-6A0A075B6B2 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6n-6A0A075B6B2 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6n-6A0A075B6B2 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6n-6A0A075B6B2 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6n-6A0A075B6B2 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trav6n-6A0A075B6B2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC12.43□□□□□ -0.42
Trav6n-6A0A075B6B2 Gm38345-201ENSMUST00000192635 1748 ntBASIC12.43□□□□□ -0.42
Trav6n-6A0A075B6B2 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6n-6A0A075B6B2 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6n-6A0A075B6B2 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6n-6A0A075B6B2 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Trav6n-6A0A075B6B2 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Trav6n-6A0A075B6B2 Gm12527-201ENSMUST00000117967 564 ntBASIC12.43□□□□□ -0.42
Trav6n-6A0A075B6B2 Gm37856-201ENSMUST00000191634 999 ntBASIC12.43□□□□□ -0.42
Trav6n-6A0A075B6B2 Gm44878-201ENSMUST00000205812 1295 ntBASIC12.43□□□□□ -0.42
Trav6n-6A0A075B6B2 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trav6n-6A0A075B6B2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6n-6A0A075B6B2 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trav6n-6A0A075B6B2 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6n-6A0A075B6B2 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6n-6A0A075B6B2 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trav6n-6A0A075B6B2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6n-6A0A075B6B2 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trav6n-6A0A075B6B2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6n-6A0A075B6B2 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6n-6A0A075B6B2 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6n-6A0A075B6B2 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6n-6A0A075B6B2 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6n-6A0A075B6B2 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6n-6A0A075B6B2 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Trav6n-6A0A075B6B2 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6n-6A0A075B6B2 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.42□□□□□ -0.42
Trav6n-6A0A075B6B2 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav6n-6A0A075B6B2 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-6A0A075B6B2 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-6A0A075B6B2 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-6A0A075B6B2 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-6A0A075B6B2 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-6A0A075B6B2 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-6A0A075B6B2 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-6A0A075B6B2 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-6A0A075B6B2 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-6A0A075B6B2 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-6A0A075B6B2 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-6A0A075B6B2 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav6n-6A0A075B6B2 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav6n-6A0A075B6B2 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-6A0A075B6B2 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC12.42□□□□□ -0.42
Trav6n-6A0A075B6B2 Gm10138-203ENSMUST00000206952 366 ntBASIC12.42□□□□□ -0.42
Trav6n-6A0A075B6B2 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC12.42□□□□□ -0.42
Trav6n-6A0A075B6B2 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-6A0A075B6B2 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-6A0A075B6B2 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-6A0A075B6B2 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-6A0A075B6B2 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav6n-6A0A075B6B2 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-6A0A075B6B2 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-6A0A075B6B2 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav6n-6A0A075B6B2 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-6A0A075B6B2 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.42□□□□□ -0.42
Trav6n-6A0A075B6B2 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-6A0A075B6B2 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-6A0A075B6B2 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-6A0A075B6B2 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-6A0A075B6B2 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-6A0A075B6B2 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6n-6A0A075B6B2 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC12.41□□□□□ -0.42
Trav6n-6A0A075B6B2 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6n-6A0A075B6B2 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6n-6A0A075B6B2 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6n-6A0A075B6B2 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6n-6A0A075B6B2 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms