Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12d-3A0A075B6A4 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.48□□□□□ -0.41
Trav12d-3A0A075B6A4 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12d-3A0A075B6A4 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC12.48□□□□□ -0.41
Trav12d-3A0A075B6A4 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12d-3A0A075B6A4 Gm12922-201ENSMUST00000120626 809 ntBASIC12.48□□□□□ -0.41
Trav12d-3A0A075B6A4 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12d-3A0A075B6A4 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC12.48□□□□□ -0.41
Trav12d-3A0A075B6A4 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12d-3A0A075B6A4 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12d-3A0A075B6A4 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12d-3A0A075B6A4 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12d-3A0A075B6A4 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12d-3A0A075B6A4 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12d-3A0A075B6A4 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12d-3A0A075B6A4 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trav12d-3A0A075B6A4 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav12d-3A0A075B6A4 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12d-3A0A075B6A4 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12d-3A0A075B6A4 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12d-3A0A075B6A4 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12d-3A0A075B6A4 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12d-3A0A075B6A4 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12d-3A0A075B6A4 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12d-3A0A075B6A4 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav12d-3A0A075B6A4 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12d-3A0A075B6A4 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12d-3A0A075B6A4 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12d-3A0A075B6A4 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12d-3A0A075B6A4 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12d-3A0A075B6A4 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12d-3A0A075B6A4 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12d-3A0A075B6A4 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12d-3A0A075B6A4 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12d-3A0A075B6A4 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Trav12d-3A0A075B6A4 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12d-3A0A075B6A4 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav12d-3A0A075B6A4 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12d-3A0A075B6A4 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trav12d-3A0A075B6A4 Gm13401-201ENSMUST00000117074 291 ntBASIC12.47□□□□□ -0.41
Trav12d-3A0A075B6A4 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC12.47□□□□□ -0.41
Trav12d-3A0A075B6A4 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12d-3A0A075B6A4 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC12.47□□□□□ -0.41
Trav12d-3A0A075B6A4 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Trav12d-3A0A075B6A4 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12d-3A0A075B6A4 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC12.47□□□□□ -0.41
Trav12d-3A0A075B6A4 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav12d-3A0A075B6A4 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12d-3A0A075B6A4 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12d-3A0A075B6A4 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12d-3A0A075B6A4 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav12d-3A0A075B6A4 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12d-3A0A075B6A4 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12d-3A0A075B6A4 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12d-3A0A075B6A4 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12d-3A0A075B6A4 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12d-3A0A075B6A4 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12d-3A0A075B6A4 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12d-3A0A075B6A4 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12d-3A0A075B6A4 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12d-3A0A075B6A4 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
Trav12d-3A0A075B6A4 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trav12d-3A0A075B6A4 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12d-3A0A075B6A4 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12d-3A0A075B6A4 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12d-3A0A075B6A4 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC12.46□□□□□ -0.41
Trav12d-3A0A075B6A4 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12d-3A0A075B6A4 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC12.46□□□□□ -0.41
Trav12d-3A0A075B6A4 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trav12d-3A0A075B6A4 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12d-3A0A075B6A4 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12d-3A0A075B6A4 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12d-3A0A075B6A4 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav12d-3A0A075B6A4 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav12d-3A0A075B6A4 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav12d-3A0A075B6A4 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
Trav12d-3A0A075B6A4 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav12d-3A0A075B6A4 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12d-3A0A075B6A4 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12d-3A0A075B6A4 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav12d-3A0A075B6A4 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Trav12d-3A0A075B6A4 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav12d-3A0A075B6A4 AL590614.2-201ENSMUST00000225374 1937 ntBASIC12.45□□□□□ -0.42
Trav12d-3A0A075B6A4 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12d-3A0A075B6A4 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12d-3A0A075B6A4 Gm10129-202ENSMUST00000193100 1316 ntBASIC12.45□□□□□ -0.42
Trav12d-3A0A075B6A4 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12d-3A0A075B6A4 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Trav12d-3A0A075B6A4 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12d-3A0A075B6A4 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12d-3A0A075B6A4 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12d-3A0A075B6A4 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12d-3A0A075B6A4 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Trav12d-3A0A075B6A4 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav12d-3A0A075B6A4 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12d-3A0A075B6A4 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12d-3A0A075B6A4 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav12d-3A0A075B6A4 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12d-3A0A075B6A4 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav12d-3A0A075B6A4 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms