Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC13.65□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC13.65□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Gm24841-201ENSMUST00000158676 357 ntBASIC13.64□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC13.64□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC13.64□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC13.64□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Gm10517-202ENSMUST00000192970 758 ntBASIC13.63□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.63□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Gm12382-201ENSMUST00000122005 922 ntBASIC13.62□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Gm13158-201ENSMUST00000122007 736 ntBASIC13.62□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.62□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15-2-dv6-2A0A075B650 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms