Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav12-3A0A075B648 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-3A0A075B648 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-3A0A075B648 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-3A0A075B648 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-3A0A075B648 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-3A0A075B648 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-3A0A075B648 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-3A0A075B648 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-3A0A075B648 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-3A0A075B648 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-3A0A075B648 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-3A0A075B648 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.17□□□□□ -0.46
Trav12-3A0A075B648 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12-3A0A075B648 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12-3A0A075B648 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12-3A0A075B648 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12-3A0A075B648 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.17□□□□□ -0.46
Trav12-3A0A075B648 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12-3A0A075B648 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12-3A0A075B648 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12-3A0A075B648 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12-3A0A075B648 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12-3A0A075B648 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12-3A0A075B648 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav12-3A0A075B648 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12-3A0A075B648 Gm10418-201ENSMUST00000100943 576 ntBASIC12.17□□□□□ -0.46
Trav12-3A0A075B648 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav12-3A0A075B648 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC12.17□□□□□ -0.46
Trav12-3A0A075B648 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12-3A0A075B648 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12-3A0A075B648 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12-3A0A075B648 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.17□□□□□ -0.46
Trav12-3A0A075B648 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12-3A0A075B648 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12-3A0A075B648 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12-3A0A075B648 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12-3A0A075B648 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12-3A0A075B648 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav12-3A0A075B648 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12-3A0A075B648 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.17□□□□□ -0.46
Trav12-3A0A075B648 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Trav12-3A0A075B648 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12-3A0A075B648 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12-3A0A075B648 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav12-3A0A075B648 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12-3A0A075B648 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav12-3A0A075B648 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12-3A0A075B648 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav12-3A0A075B648 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav12-3A0A075B648 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav12-3A0A075B648 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12-3A0A075B648 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12-3A0A075B648 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12-3A0A075B648 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC12.16□□□□□ -0.46
Trav12-3A0A075B648 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12-3A0A075B648 AC107711.5-202ENSMUST00000226429 702 ntBASIC12.16□□□□□ -0.46
Trav12-3A0A075B648 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Trav12-3A0A075B648 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12-3A0A075B648 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12-3A0A075B648 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12-3A0A075B648 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12-3A0A075B648 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav12-3A0A075B648 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12-3A0A075B648 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12-3A0A075B648 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12-3A0A075B648 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12-3A0A075B648 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12-3A0A075B648 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12-3A0A075B648 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12-3A0A075B648 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12-3A0A075B648 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12-3A0A075B648 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12-3A0A075B648 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12-3A0A075B648 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12-3A0A075B648 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12-3A0A075B648 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12-3A0A075B648 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav12-3A0A075B648 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav12-3A0A075B648 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12-3A0A075B648 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12-3A0A075B648 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12-3A0A075B648 Gm7417-201ENSMUST00000192950 473 ntBASIC12.15□□□□□ -0.46
Trav12-3A0A075B648 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav12-3A0A075B648 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12-3A0A075B648 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12-3A0A075B648 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12-3A0A075B648 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12-3A0A075B648 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12-3A0A075B648 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav12-3A0A075B648 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12-3A0A075B648 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12-3A0A075B648 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12-3A0A075B648 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav12-3A0A075B648 Gm19721-201ENSMUST00000195284 1764 ntBASIC12.15□□□□□ -0.46
Trav12-3A0A075B648 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Trav12-3A0A075B648 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav12-3A0A075B648 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Trav12-3A0A075B648 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav12-3A0A075B648 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms