Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav8-1A0A075B641 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav8-1A0A075B641 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav8-1A0A075B641 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav8-1A0A075B641 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav8-1A0A075B641 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trav8-1A0A075B641 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav8-1A0A075B641 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav8-1A0A075B641 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav8-1A0A075B641 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Trav8-1A0A075B641 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav8-1A0A075B641 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav8-1A0A075B641 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav8-1A0A075B641 AC133083.1-201ENSMUST00000221736 2209 ntBASIC11.99□□□□□ -0.49
Trav8-1A0A075B641 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav8-1A0A075B641 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav8-1A0A075B641 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav8-1A0A075B641 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav8-1A0A075B641 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Trav8-1A0A075B641 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav8-1A0A075B641 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trav8-1A0A075B641 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Trav8-1A0A075B641 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav8-1A0A075B641 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav8-1A0A075B641 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav8-1A0A075B641 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav8-1A0A075B641 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav8-1A0A075B641 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav8-1A0A075B641 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav8-1A0A075B641 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav8-1A0A075B641 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav8-1A0A075B641 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav8-1A0A075B641 AC093043.3-201ENSMUST00000226531 2273 ntBASIC11.99□□□□□ -0.49
Trav8-1A0A075B641 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav8-1A0A075B641 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav8-1A0A075B641 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav8-1A0A075B641 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav8-1A0A075B641 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav8-1A0A075B641 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav8-1A0A075B641 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav8-1A0A075B641 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav8-1A0A075B641 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8-1A0A075B641 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8-1A0A075B641 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8-1A0A075B641 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8-1A0A075B641 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8-1A0A075B641 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8-1A0A075B641 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8-1A0A075B641 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8-1A0A075B641 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8-1A0A075B641 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8-1A0A075B641 Gm11620-201ENSMUST00000118770 1845 ntBASIC11.98□□□□□ -0.49
Trav8-1A0A075B641 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav8-1A0A075B641 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8-1A0A075B641 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8-1A0A075B641 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8-1A0A075B641 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8-1A0A075B641 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8-1A0A075B641 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8-1A0A075B641 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8-1A0A075B641 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8-1A0A075B641 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC11.98□□□□□ -0.49
Trav8-1A0A075B641 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav8-1A0A075B641 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8-1A0A075B641 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8-1A0A075B641 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8-1A0A075B641 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav8-1A0A075B641 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8-1A0A075B641 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8-1A0A075B641 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8-1A0A075B641 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8-1A0A075B641 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav8-1A0A075B641 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8-1A0A075B641 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms