Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trav9n-4A0A075B631 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9n-4A0A075B631 Gm12527-201ENSMUST00000117967 564 ntBASIC11.4□□□□□ -0.58
Trav9n-4A0A075B631 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav9n-4A0A075B631 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9n-4A0A075B631 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9n-4A0A075B631 Hivep3-201ENSMUST00000084306 2973 ntBASIC11.4□□□□□ -0.58
Trav9n-4A0A075B631 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9n-4A0A075B631 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Trav9n-4A0A075B631 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Trav9n-4A0A075B631 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9n-4A0A075B631 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trav9n-4A0A075B631 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9n-4A0A075B631 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9n-4A0A075B631 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Trav9n-4A0A075B631 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9n-4A0A075B631 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav9n-4A0A075B631 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav9n-4A0A075B631 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC11.4□□□□□ -0.59
Trav9n-4A0A075B631 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC11.4□□□□□ -0.59
Trav9n-4A0A075B631 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav9n-4A0A075B631 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9n-4A0A075B631 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9n-4A0A075B631 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9n-4A0A075B631 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9n-4A0A075B631 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9n-4A0A075B631 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9n-4A0A075B631 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9n-4A0A075B631 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9n-4A0A075B631 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9n-4A0A075B631 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9n-4A0A075B631 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Trav9n-4A0A075B631 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9n-4A0A075B631 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9n-4A0A075B631 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC11.39□□□□□ -0.59
Trav9n-4A0A075B631 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9n-4A0A075B631 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC11.39□□□□□ -0.59
Trav9n-4A0A075B631 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC11.39□□□□□ -0.59
Trav9n-4A0A075B631 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9n-4A0A075B631 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav9n-4A0A075B631 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9n-4A0A075B631 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Trav9n-4A0A075B631 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9n-4A0A075B631 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trav9n-4A0A075B631 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9n-4A0A075B631 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9n-4A0A075B631 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9n-4A0A075B631 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9n-4A0A075B631 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9n-4A0A075B631 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9n-4A0A075B631 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9n-4A0A075B631 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9n-4A0A075B631 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9n-4A0A075B631 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC11.38□□□□□ -0.59
Trav9n-4A0A075B631 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9n-4A0A075B631 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9n-4A0A075B631 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9n-4A0A075B631 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9n-4A0A075B631 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9n-4A0A075B631 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trav9n-4A0A075B631 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9n-4A0A075B631 Gm5643-201ENSMUST00000117081 966 ntBASIC11.38□□□□□ -0.59
Trav9n-4A0A075B631 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9n-4A0A075B631 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC11.38□□□□□ -0.59
Trav9n-4A0A075B631 Gm17661-201ENSMUST00000170317 270 ntBASIC11.38□□□□□ -0.59
Trav9n-4A0A075B631 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9n-4A0A075B631 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC11.38□□□□□ -0.59
Trav9n-4A0A075B631 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9n-4A0A075B631 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9n-4A0A075B631 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9n-4A0A075B631 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9n-4A0A075B631 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9n-4A0A075B631 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9n-4A0A075B631 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav9n-4A0A075B631 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9n-4A0A075B631 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9n-4A0A075B631 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9n-4A0A075B631 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trav9n-4A0A075B631 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav9n-4A0A075B631 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav9n-4A0A075B631 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav9n-4A0A075B631 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav9n-4A0A075B631 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav9n-4A0A075B631 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Trav9n-4A0A075B631 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav9n-4A0A075B631 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav9n-4A0A075B631 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav9n-4A0A075B631 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav9n-4A0A075B631 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav9n-4A0A075B631 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav9n-4A0A075B631 Gm36858-201ENSMUST00000194501 2391 ntBASIC11.37□□□□□ -0.59
Trav9n-4A0A075B631 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav9n-4A0A075B631 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Trav9n-4A0A075B631 Gm12085-201ENSMUST00000119263 940 ntBASIC11.37□□□□□ -0.59
Trav9n-4A0A075B631 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav9n-4A0A075B631 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav9n-4A0A075B631 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav9n-4A0A075B631 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav9n-4A0A075B631 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav9n-4A0A075B631 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms