Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trav5-1A0A075B5Z7 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav5-1A0A075B5Z7 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav5-1A0A075B5Z7 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav5-1A0A075B5Z7 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav5-1A0A075B5Z7 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav5-1A0A075B5Z7 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav5-1A0A075B5Z7 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav5-1A0A075B5Z7 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav5-1A0A075B5Z7 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav5-1A0A075B5Z7 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav5-1A0A075B5Z7 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav5-1A0A075B5Z7 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav5-1A0A075B5Z7 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5-1A0A075B5Z7 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5-1A0A075B5Z7 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5-1A0A075B5Z7 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Trav5-1A0A075B5Z7 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav5-1A0A075B5Z7 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5-1A0A075B5Z7 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.29□□□□□ -0.12
Trav5-1A0A075B5Z7 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.29□□□□□ -0.12
Trav5-1A0A075B5Z7 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5-1A0A075B5Z7 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.29□□□□□ -0.12
Trav5-1A0A075B5Z7 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5-1A0A075B5Z7 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5-1A0A075B5Z7 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav5-1A0A075B5Z7 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5-1A0A075B5Z7 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5-1A0A075B5Z7 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5-1A0A075B5Z7 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trav5-1A0A075B5Z7 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav5-1A0A075B5Z7 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5-1A0A075B5Z7 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trav5-1A0A075B5Z7 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5-1A0A075B5Z7 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5-1A0A075B5Z7 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5-1A0A075B5Z7 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5-1A0A075B5Z7 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5-1A0A075B5Z7 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Trav5-1A0A075B5Z7 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav5-1A0A075B5Z7 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Trav5-1A0A075B5Z7 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trav5-1A0A075B5Z7 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.28□□□□□ -0.12
Trav5-1A0A075B5Z7 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5-1A0A075B5Z7 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trav5-1A0A075B5Z7 Gm27742-201ENSMUST00000184667 60 ntBASIC14.28□□□□□ -0.12
Trav5-1A0A075B5Z7 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.28□□□□□ -0.12
Trav5-1A0A075B5Z7 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5-1A0A075B5Z7 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5-1A0A075B5Z7 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.28□□□□□ -0.12
Trav5-1A0A075B5Z7 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Trav5-1A0A075B5Z7 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5-1A0A075B5Z7 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5-1A0A075B5Z7 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5-1A0A075B5Z7 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5-1A0A075B5Z7 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5-1A0A075B5Z7 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav5-1A0A075B5Z7 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5-1A0A075B5Z7 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Trav5-1A0A075B5Z7 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav5-1A0A075B5Z7 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav5-1A0A075B5Z7 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Trav5-1A0A075B5Z7 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Trav5-1A0A075B5Z7 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav5-1A0A075B5Z7 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav5-1A0A075B5Z7 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav5-1A0A075B5Z7 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.27□□□□□ -0.12
Trav5-1A0A075B5Z7 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC14.27□□□□□ -0.12
Trav5-1A0A075B5Z7 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.27□□□□□ -0.13
Trav5-1A0A075B5Z7 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.27□□□□□ -0.13
Trav5-1A0A075B5Z7 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5-1A0A075B5Z7 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5-1A0A075B5Z7 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5-1A0A075B5Z7 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5-1A0A075B5Z7 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5-1A0A075B5Z7 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Trav5-1A0A075B5Z7 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5-1A0A075B5Z7 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trav5-1A0A075B5Z7 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5-1A0A075B5Z7 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5-1A0A075B5Z7 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.27□□□□□ -0.13
Trav5-1A0A075B5Z7 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5-1A0A075B5Z7 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5-1A0A075B5Z7 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.27□□□□□ -0.13
Trav5-1A0A075B5Z7 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5-1A0A075B5Z7 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5-1A0A075B5Z7 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav5-1A0A075B5Z7 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5-1A0A075B5Z7 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5-1A0A075B5Z7 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5-1A0A075B5Z7 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Trav5-1A0A075B5Z7 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5-1A0A075B5Z7 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5-1A0A075B5Z7 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5-1A0A075B5Z7 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5-1A0A075B5Z7 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Trav5-1A0A075B5Z7 Gm17807-201ENSMUST00000186869 298 ntBASIC14.26□□□□□ -0.13
Trav5-1A0A075B5Z7 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5-1A0A075B5Z7 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5-1A0A075B5Z7 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms