Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 RNU6-31P-201ENST00000384388 108 ntBASIC4.54□□□□□ -1.68
CLPTM1O96005 MIR223-201ENST00000385204 110 ntBASIC4.54□□□□□ -1.68
CLPTM1O96005 LRRC37BP1-201ENST00000398851 714 ntBASIC4.54□□□□□ -1.68
CLPTM1O96005 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.54□□□□□ -1.68
CLPTM1O96005 TAF9BP2-201ENST00000400856 499 ntBASIC4.54□□□□□ -1.68
CLPTM1O96005 MIR921-201ENST00000401133 56 ntBASIC4.54□□□□□ -1.68
CLPTM1O96005 RN7SKP278-201ENST00000410504 342 ntBASIC4.54□□□□□ -1.68
CLPTM1O96005 RNA5SP104-201ENST00000410989 118 ntBASIC4.54□□□□□ -1.68
CLPTM1O96005 MTCYBP7-201ENST00000419540 1134 ntBASIC4.54□□□□□ -1.68
CLPTM1O96005 AL606495.1-201ENST00000422100 813 ntBASIC4.54□□□□□ -1.68
CLPTM1O96005 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.54□□□□□ -1.68
CLPTM1O96005 BX119904.1-201ENST00000432026 348 ntBASIC4.54□□□□□ -1.68
CLPTM1O96005 MTND2P2-201ENST00000434633 945 ntBASIC4.54□□□□□ -1.68
CLPTM1O96005 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.54□□□□□ -1.68
CLPTM1O96005 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.54□□□□□ -1.68
CLPTM1O96005 CNOT7P2-201ENST00000441051 832 ntBASIC4.54□□□□□ -1.68
CLPTM1O96005 AL163193.1-201ENST00000444895 788 ntBASIC4.54□□□□□ -1.68
CLPTM1O96005 AL096829.2-201ENST00000446582 742 ntBASIC4.54□□□□□ -1.68
CLPTM1O96005 FAR2P1-206ENST00000449736 709 ntBASIC4.54□□□□□ -1.68
CLPTM1O96005 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.54□□□□□ -1.68
CLPTM1O96005 FGF7P3-201ENST00000454645 303 ntBASIC4.54□□□□□ -1.68
CLPTM1O96005 RPS17P2-201ENST00000461663 408 ntBASIC4.54□□□□□ -1.68
CLPTM1O96005 RPL7P6-201ENST00000480903 738 ntBASIC4.54□□□□□ -1.68
CLPTM1O96005 AC079841.1-201ENST00000481228 950 ntBASIC4.54□□□□□ -1.68
CLPTM1O96005 PPM1AP1-201ENST00000502740 1135 ntBASIC4.54□□□□□ -1.68
CLPTM1O96005 AC112518.2-201ENST00000508565 425 ntBASIC4.54□□□□□ -1.68
CLPTM1O96005 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.54□□□□□ -1.68
CLPTM1O96005 RNU5A-7P-201ENST00000515979 116 ntBASIC4.54□□□□□ -1.68
CLPTM1O96005 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.54□□□□□ -1.68
CLPTM1O96005 AC100770.1-201ENST00000532310 322 ntBASIC4.54□□□□□ -1.68
CLPTM1O96005 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.54□□□□□ -1.68
CLPTM1O96005 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CLPTM1O96005 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.54□□□□□ -1.68
CLPTM1O96005 AC069240.1-201ENST00000548774 375 ntBASIC4.54□□□□□ -1.68
CLPTM1O96005 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.54□□□□□ -1.68
CLPTM1O96005 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.54□□□□□ -1.68
CLPTM1O96005 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.54□□□□□ -1.68
CLPTM1O96005 AC090515.3-201ENST00000560431 315 ntBASIC4.54□□□□□ -1.68
CLPTM1O96005 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.54□□□□□ -1.68
CLPTM1O96005 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.54□□□□□ -1.68
CLPTM1O96005 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.54□□□□□ -1.68
CLPTM1O96005 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.54□□□□□ -1.68
CLPTM1O96005 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.54□□□□□ -1.68
CLPTM1O96005 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.54□□□□□ -1.68
CLPTM1O96005 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.54□□□□□ -1.68
CLPTM1O96005 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.54□□□□□ -1.68
CLPTM1O96005 MTCO2P22-201ENST00000603246 681 ntBASIC4.54□□□□□ -1.68
CLPTM1O96005 AC005034.4-201ENST00000603612 899 ntBASIC4.54□□□□□ -1.68
CLPTM1O96005 AP005229.2-201ENST00000609980 697 ntBASIC4.54□□□□□ -1.68
CLPTM1O96005 AC126915.2-201ENST00000610957 190 ntBASIC4.54□□□□□ -1.68
CLPTM1O96005 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.54□□□□□ -1.68
CLPTM1O96005 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.54□□□□□ -1.68
CLPTM1O96005 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.54□□□□□ -1.68
CLPTM1O96005 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLPTM1O96005 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLPTM1O96005 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLPTM1O96005 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
CLPTM1O96005 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.54□□□□□ -1.68
CLPTM1O96005 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLPTM1O96005 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.54□□□□□ -1.68
CLPTM1O96005 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CLPTM1O96005 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CLPTM1O96005 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
CLPTM1O96005 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CLPTM1O96005 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLPTM1O96005 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLPTM1O96005 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLPTM1O96005 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.53□□□□□ -1.68
CLPTM1O96005 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CLPTM1O96005 RNU6-796P-201ENST00000391086 107 ntBASIC4.53□□□□□ -1.68
CLPTM1O96005 AL645733.1-201ENST00000402250 217 ntBASIC4.53□□□□□ -1.68
CLPTM1O96005 DUTP5-201ENST00000406790 469 ntBASIC4.53□□□□□ -1.68
CLPTM1O96005 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.53□□□□□ -1.68
CLPTM1O96005 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.53□□□□□ -1.68
CLPTM1O96005 RN7SKP216-201ENST00000411050 312 ntBASIC4.53□□□□□ -1.68
CLPTM1O96005 RPL26P37-201ENST00000411983 438 ntBASIC4.53□□□□□ -1.68
CLPTM1O96005 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.53□□□□□ -1.68
CLPTM1O96005 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.53□□□□□ -1.68
CLPTM1O96005 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CLPTM1O96005 AC004552.1-201ENST00000419089 348 ntBASIC4.53□□□□□ -1.68
CLPTM1O96005 OR2AM1P-201ENST00000422137 422 ntBASIC4.53□□□□□ -1.68
CLPTM1O96005 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.53□□□□□ -1.68
CLPTM1O96005 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.53□□□□□ -1.68
CLPTM1O96005 VN1R42P-201ENST00000424651 344 ntBASIC4.53□□□□□ -1.68
CLPTM1O96005 AC093655.2-201ENST00000425735 631 ntBASIC4.53□□□□□ -1.68
CLPTM1O96005 AC022022.1-201ENST00000430304 178 ntBASIC4.53□□□□□ -1.68
CLPTM1O96005 RPS29P10-201ENST00000439197 166 ntBASIC4.53□□□□□ -1.68
CLPTM1O96005 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CLPTM1O96005 RPL7P55-201ENST00000450522 746 ntBASIC4.53□□□□□ -1.68
CLPTM1O96005 RPS26P3-201ENST00000470205 348 ntBASIC4.53□□□□□ -1.68
CLPTM1O96005 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.53□□□□□ -1.68
CLPTM1O96005 RPS18P6-201ENST00000476880 458 ntBASIC4.53□□□□□ -1.68
CLPTM1O96005 AC090543.2-201ENST00000483963 348 ntBASIC4.53□□□□□ -1.68
CLPTM1O96005 AC004057.1-201ENST00000485827 348 ntBASIC4.53□□□□□ -1.68
CLPTM1O96005 AC108022.1-201ENST00000493466 478 ntBASIC4.53□□□□□ -1.68
CLPTM1O96005 AC025445.1-201ENST00000502728 300 ntBASIC4.53□□□□□ -1.68
CLPTM1O96005 RPS4XP20-201ENST00000505751 772 ntBASIC4.53□□□□□ -1.68
CLPTM1O96005 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.53□□□□□ -1.68
CLPTM1O96005 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.53□□□□□ -1.68
CLPTM1O96005 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms