Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM49D1C9J1S8 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM49D1C9J1S8 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM49D1C9J1S8 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM49D1C9J1S8 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
TRIM49D1C9J1S8 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM49D1C9J1S8 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM49D1C9J1S8 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
TRIM49D1C9J1S8 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM49D1C9J1S8 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM49D1C9J1S8 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM49D1C9J1S8 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM49D1C9J1S8 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM49D1C9J1S8 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
TRIM49D1C9J1S8 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
TRIM49D1C9J1S8 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.25□□□□□ -1.73
TRIM49D1C9J1S8 TMSB10P2-201ENST00000416049 131 ntBASIC4.25□□□□□ -1.73
TRIM49D1C9J1S8 NDUFA5P1-201ENST00000433858 341 ntBASIC4.25□□□□□ -1.73
TRIM49D1C9J1S8 AL132765.1-201ENST00000434165 553 ntBASIC4.25□□□□□ -1.73
TRIM49D1C9J1S8 ARL4AP4-201ENST00000434170 518 ntBASIC4.25□□□□□ -1.73
TRIM49D1C9J1S8 FTH1P16-201ENST00000435241 552 ntBASIC4.25□□□□□ -1.73
TRIM49D1C9J1S8 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC4.25□□□□□ -1.73
TRIM49D1C9J1S8 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.25□□□□□ -1.73
TRIM49D1C9J1S8 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.25□□□□□ -1.73
TRIM49D1C9J1S8 RSL24D1P2-201ENST00000445584 366 ntBASIC4.25□□□□□ -1.73
TRIM49D1C9J1S8 FCF1P7-201ENST00000451185 558 ntBASIC4.25□□□□□ -1.73
TRIM49D1C9J1S8 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.25□□□□□ -1.73
TRIM49D1C9J1S8 AC092324.1-201ENST00000468671 324 ntBASIC4.25□□□□□ -1.73
TRIM49D1C9J1S8 RPS26P15-201ENST00000488067 348 ntBASIC4.25□□□□□ -1.73
TRIM49D1C9J1S8 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.25□□□□□ -1.73
TRIM49D1C9J1S8 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.25□□□□□ -1.73
TRIM49D1C9J1S8 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.25□□□□□ -1.73
TRIM49D1C9J1S8 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC4.25□□□□□ -1.73
TRIM49D1C9J1S8 SNORD116-30-201ENST00000516468 85 ntBASIC4.25□□□□□ -1.73
TRIM49D1C9J1S8 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
TRIM49D1C9J1S8 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.25□□□□□ -1.73
TRIM49D1C9J1S8 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
TRIM49D1C9J1S8 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.25□□□□□ -1.73
TRIM49D1C9J1S8 AL008729.2-201ENST00000606393 473 ntBASIC4.25□□□□□ -1.73
TRIM49D1C9J1S8 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.25□□□□□ -1.73
TRIM49D1C9J1S8 AP005019.3-201ENST00000620418 560 ntBASIC4.25□□□□□ -1.73
TRIM49D1C9J1S8 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.25□□□□□ -1.73
TRIM49D1C9J1S8 AC008013.2-202ENST00000637965 364 ntBASIC4.25□□□□□ -1.73
TRIM49D1C9J1S8 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.25□□□□□ -1.73
TRIM49D1C9J1S8 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
TRIM49D1C9J1S8 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
TRIM49D1C9J1S8 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
TRIM49D1C9J1S8 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
TRIM49D1C9J1S8 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 AC103591.2-201ENST00000265259 766 ntBASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 MIR331-201ENST00000362302 94 ntBASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 RNA5SP87-201ENST00000384155 118 ntBASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 SNORA37-201ENST00000384504 129 ntBASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 RBMY2KP-201ENST00000418221 992 ntBASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 AC073648.4-201ENST00000442655 781 ntBASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 RAD23BP3-201ENST00000454157 1152 ntBASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 BNIP3P41-201ENST00000503774 571 ntBASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 AC025857.1-201ENST00000525252 377 ntBASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 MIR4675-201ENST00000577898 77 ntBASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 AC008782.1-201ENST00000603386 430 ntBASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 FAM25E-202ENST00000608562 189 ntBASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 AC116651.1-201ENST00000609724 556 ntBASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 AC107905.1-201ENST00000616204 426 ntBASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 LINC00901.1-201ENST00000617252 152 ntBASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 AP001784.1-201ENST00000624107 428 ntBASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM49D1C9J1S8 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms