Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
RNF11Q9Y3C5 NRBF2P2-201ENST00000413087 861 ntBASIC4.13□□□□□ -1.75
RNF11Q9Y3C5 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.13□□□□□ -1.75
RNF11Q9Y3C5 TRIM60P17-201ENST00000415181 719 ntBASIC4.13□□□□□ -1.75
RNF11Q9Y3C5 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.13□□□□□ -1.75
RNF11Q9Y3C5 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.13□□□□□ -1.75
RNF11Q9Y3C5 AL132765.1-201ENST00000434165 553 ntBASIC4.13□□□□□ -1.75
RNF11Q9Y3C5 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.13□□□□□ -1.75
RNF11Q9Y3C5 PHBP16-201ENST00000446318 950 ntBASIC4.13□□□□□ -1.75
RNF11Q9Y3C5 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.13□□□□□ -1.75
RNF11Q9Y3C5 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.13□□□□□ -1.75
RNF11Q9Y3C5 AC138409.2-202ENST00000507274 458 ntBASIC4.13□□□□□ -1.75
RNF11Q9Y3C5 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.13□□□□□ -1.75
RNF11Q9Y3C5 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.13□□□□□ -1.75
RNF11Q9Y3C5 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RNF11Q9Y3C5 OR5AN2P-201ENST00000534535 896 ntBASIC4.13□□□□□ -1.75
RNF11Q9Y3C5 AC068831.4-201ENST00000556118 109 ntBASIC4.13□□□□□ -1.75
RNF11Q9Y3C5 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.13□□□□□ -1.75
RNF11Q9Y3C5 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.13□□□□□ -1.75
RNF11Q9Y3C5 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.13□□□□□ -1.75
RNF11Q9Y3C5 AC090948.1-201ENST00000607464 549 ntBASIC4.13□□□□□ -1.75
RNF11Q9Y3C5 AC138907.10-201ENST00000623708 983 ntBASIC4.13□□□□□ -1.75
RNF11Q9Y3C5 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RNF11Q9Y3C5 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RNF11Q9Y3C5 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RNF11Q9Y3C5 XKRY2-202ENST00000623874 1581 ntBASIC4.13□□□□□ -1.75
RNF11Q9Y3C5 XKRY-202ENST00000624960 1581 ntBASIC4.13□□□□□ -1.75
RNF11Q9Y3C5 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
RNF11Q9Y3C5 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RNF11Q9Y3C5 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.13□□□□□ -1.75
RNF11Q9Y3C5 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
RNF11Q9Y3C5 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RNF11Q9Y3C5 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.12□□□□□ -1.75
RNF11Q9Y3C5 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RNF11Q9Y3C5 AC027287.1-201ENST00000553115 1453 ntBASIC4.12□□□□□ -1.75
RNF11Q9Y3C5 AC012618.3-205ENST00000637896 1496 ntBASIC4.12□□□□□ -1.75
RNF11Q9Y3C5 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
RNF11Q9Y3C5 AL031985.3-201ENST00000565390 2449 ntBASIC4.12□□□□□ -1.75
RNF11Q9Y3C5 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RNF11Q9Y3C5 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.12□□□□□ -1.75
RNF11Q9Y3C5 MIR708-201ENST00000390708 88 ntBASIC4.12□□□□□ -1.75
RNF11Q9Y3C5 AL157831.1-201ENST00000426134 473 ntBASIC4.12□□□□□ -1.75
RNF11Q9Y3C5 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.12□□□□□ -1.75
RNF11Q9Y3C5 RPL12P28-201ENST00000430852 489 ntBASIC4.12□□□□□ -1.75
RNF11Q9Y3C5 AC011998.1-201ENST00000433403 117 ntBASIC4.12□□□□□ -1.75
RNF11Q9Y3C5 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.12□□□□□ -1.75
RNF11Q9Y3C5 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.12□□□□□ -1.75
RNF11Q9Y3C5 RN7SL98P-201ENST00000462271 300 ntBASIC4.12□□□□□ -1.75
RNF11Q9Y3C5 RN7SL585P-201ENST00000470538 280 ntBASIC4.12□□□□□ -1.75
RNF11Q9Y3C5 AC135999.1-201ENST00000478962 479 ntBASIC4.12□□□□□ -1.75
RNF11Q9Y3C5 AC010374.1-201ENST00000503762 1237 ntBASIC4.12□□□□□ -1.75
RNF11Q9Y3C5 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.12□□□□□ -1.75
RNF11Q9Y3C5 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.12□□□□□ -1.75
RNF11Q9Y3C5 AF186190.1-201ENST00000517470 480 ntBASIC4.12□□□□□ -1.75
RNF11Q9Y3C5 AC010476.1-201ENST00000519111 851 ntBASIC4.12□□□□□ -1.75
RNF11Q9Y3C5 IGLVIV-53-201ENST00000520107 367 ntBASIC4.12□□□□□ -1.75
RNF11Q9Y3C5 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.12□□□□□ -1.75
RNF11Q9Y3C5 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.12□□□□□ -1.75
RNF11Q9Y3C5 AC137768.1-201ENST00000549998 553 ntBASIC4.12□□□□□ -1.75
RNF11Q9Y3C5 MIR4715-201ENST00000584117 79 ntBASIC4.12□□□□□ -1.75
RNF11Q9Y3C5 AL445363.3-201ENST00000623080 671 ntBASIC4.12□□□□□ -1.75
RNF11Q9Y3C5 AC008785.1-201ENST00000624475 456 ntBASIC4.12□□□□□ -1.75
RNF11Q9Y3C5 CDC27P2-201ENST00000425026 1922 ntBASIC4.12□□□□□ -1.75
RNF11Q9Y3C5 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RNF11Q9Y3C5 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.12□□□□□ -1.75
RNF11Q9Y3C5 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
RNF11Q9Y3C5 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RNF11Q9Y3C5 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
RNF11Q9Y3C5 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.11□□□□□ -1.75
RNF11Q9Y3C5 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.11□□□□□ -1.75
RNF11Q9Y3C5 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
RNF11Q9Y3C5 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RNF11Q9Y3C5 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
RNF11Q9Y3C5 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.11□□□□□ -1.75
RNF11Q9Y3C5 MFSD13B-201ENST00000420133 1290 ntBASIC4.11□□□□□ -1.75
RNF11Q9Y3C5 RPL7P4-203ENST00000430239 730 ntBASIC4.11□□□□□ -1.75
RNF11Q9Y3C5 AL512326.1-201ENST00000443050 721 ntBASIC4.11□□□□□ -1.75
RNF11Q9Y3C5 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC4.11□□□□□ -1.75
RNF11Q9Y3C5 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.11□□□□□ -1.75
RNF11Q9Y3C5 MTND2P25-201ENST00000449028 610 ntBASIC4.11□□□□□ -1.75
RNF11Q9Y3C5 RPL23AP81-201ENST00000455252 467 ntBASIC4.11□□□□□ -1.75
RNF11Q9Y3C5 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.11□□□□□ -1.75
RNF11Q9Y3C5 AC017037.1-201ENST00000508460 471 ntBASIC4.11□□□□□ -1.75
RNF11Q9Y3C5 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
RNF11Q9Y3C5 RNU6-964P-201ENST00000516524 69 ntBASIC4.11□□□□□ -1.75
RNF11Q9Y3C5 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.11□□□□□ -1.75
RNF11Q9Y3C5 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.11□□□□□ -1.75
RNF11Q9Y3C5 TRAV8-5-201ENST00000537369 341 ntBASIC4.11□□□□□ -1.75
RNF11Q9Y3C5 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.11□□□□□ -1.75
RNF11Q9Y3C5 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.11□□□□□ -1.75
RNF11Q9Y3C5 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.11□□□□□ -1.75
RNF11Q9Y3C5 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.11□□□□□ -1.75
RNF11Q9Y3C5 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.11□□□□□ -1.75
RNF11Q9Y3C5 AC020914.4-201ENST00000597690 277 ntBASIC4.11□□□□□ -1.75
RNF11Q9Y3C5 AC064801.1-201ENST00000612025 407 ntBASIC4.11□□□□□ -1.75
RNF11Q9Y3C5 MIR6730-201ENST00000622213 67 ntBASIC4.11□□□□□ -1.75
RNF11Q9Y3C5 AC140479.6-201ENST00000633535 357 ntBASIC4.11□□□□□ -1.75
RNF11Q9Y3C5 EIF2AP4-201ENST00000424793 1781 ntBASIC4.11□□□□□ -1.75
RNF11Q9Y3C5 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.11□□□□□ -1.75
RNF11Q9Y3C5 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms