Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5.27□□□□□ -1.57
SNED1Q8TER0 AC092574.1-201ENST00000609771 420 ntBASIC5.27□□□□□ -1.57
SNED1Q8TER0 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SNED1Q8TER0 TEX41-300ENST00000631048 69 ntTSL 5 BASIC5.27□□□□□ -1.57
SNED1Q8TER0 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SNED1Q8TER0 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SNED1Q8TER0 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SNED1Q8TER0 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SNED1Q8TER0 HCFC2P1-201ENST00000392864 1592 ntBASIC5.27□□□□□ -1.57
SNED1Q8TER0 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
SNED1Q8TER0 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.26□□□□□ -1.57
SNED1Q8TER0 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.26□□□□□ -1.57
SNED1Q8TER0 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SNED1Q8TER0 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
SNED1Q8TER0 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SNED1Q8TER0 RNU11-4P-201ENST00000391149 133 ntBASIC5.26□□□□□ -1.57
SNED1Q8TER0 EI24P3-201ENST00000399046 1062 ntBASIC5.26□□□□□ -1.57
SNED1Q8TER0 RN7SKP167-201ENST00000411047 285 ntBASIC5.26□□□□□ -1.57
SNED1Q8TER0 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.26□□□□□ -1.57
SNED1Q8TER0 TRIM60P13-201ENST00000432350 1283 ntBASIC5.26□□□□□ -1.57
SNED1Q8TER0 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.26□□□□□ -1.57
SNED1Q8TER0 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC5.26□□□□□ -1.57
SNED1Q8TER0 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.26□□□□□ -1.57
SNED1Q8TER0 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.26□□□□□ -1.57
SNED1Q8TER0 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.26□□□□□ -1.57
SNED1Q8TER0 RPS4XP18-201ENST00000495480 763 ntBASIC5.26□□□□□ -1.57
SNED1Q8TER0 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.26□□□□□ -1.57
SNED1Q8TER0 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.26□□□□□ -1.57
SNED1Q8TER0 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC5.26□□□□□ -1.57
SNED1Q8TER0 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.26□□□□□ -1.57
SNED1Q8TER0 LSM3P2-201ENST00000551246 273 ntBASIC5.26□□□□□ -1.57
SNED1Q8TER0 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC5.26□□□□□ -1.57
SNED1Q8TER0 TVP23BP1-201ENST00000557500 617 ntBASIC5.26□□□□□ -1.57
SNED1Q8TER0 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.26□□□□□ -1.57
SNED1Q8TER0 AGGF1P6-201ENST00000569213 976 ntBASIC5.26□□□□□ -1.57
SNED1Q8TER0 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.26□□□□□ -1.57
SNED1Q8TER0 AC024933.1-201ENST00000608472 348 ntBASIC5.26□□□□□ -1.57
SNED1Q8TER0 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.26□□□□□ -1.57
SNED1Q8TER0 AC010608.2-201ENST00000624830 470 ntBASIC5.26□□□□□ -1.57
SNED1Q8TER0 AL627171.1-201ENST00000618845 1308 ntBASIC5.26□□□□□ -1.57
SNED1Q8TER0 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SNED1Q8TER0 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.26□□□□□ -1.57
SNED1Q8TER0 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SNED1Q8TER0 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.26□□□□□ -1.57
SNED1Q8TER0 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.26□□□□□ -1.57
SNED1Q8TER0 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.26□□□□□ -1.57
SNED1Q8TER0 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SNED1Q8TER0 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SNED1Q8TER0 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
SNED1Q8TER0 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
SNED1Q8TER0 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.25□□□□□ -1.57
SNED1Q8TER0 SNORA63.1-201ENST00000362493 131 ntBASIC5.25□□□□□ -1.57
SNED1Q8TER0 PTMAP2-201ENST00000397627 327 ntBASIC5.25□□□□□ -1.57
SNED1Q8TER0 FCF1P5-201ENST00000406490 482 ntBASIC5.25□□□□□ -1.57
SNED1Q8TER0 AL356968.2-201ENST00000412769 1257 ntBASIC5.25□□□□□ -1.57
SNED1Q8TER0 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.25□□□□□ -1.57
SNED1Q8TER0 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SNED1Q8TER0 AC093578.1-201ENST00000415219 368 ntBASIC5.25□□□□□ -1.57
SNED1Q8TER0 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.25□□□□□ -1.57
SNED1Q8TER0 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC5.25□□□□□ -1.57
SNED1Q8TER0 EIF4A1P1-201ENST00000420241 934 ntBASIC5.25□□□□□ -1.57
SNED1Q8TER0 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.25□□□□□ -1.57
SNED1Q8TER0 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.25□□□□□ -1.57
SNED1Q8TER0 RN7SL812P-201ENST00000493791 279 ntBASIC5.25□□□□□ -1.57
SNED1Q8TER0 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.25□□□□□ -1.57
SNED1Q8TER0 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.25□□□□□ -1.57
SNED1Q8TER0 RNU6-551P-201ENST00000516661 103 ntBASIC5.25□□□□□ -1.57
SNED1Q8TER0 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.25□□□□□ -1.57
SNED1Q8TER0 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC5.25□□□□□ -1.57
SNED1Q8TER0 AL161912.3-201ENST00000605404 628 ntBASIC5.25□□□□□ -1.57
SNED1Q8TER0 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.25□□□□□ -1.57
SNED1Q8TER0 AC007620.3-201ENST00000608131 497 ntBASIC5.25□□□□□ -1.57
SNED1Q8TER0 AC234782.5-201ENST00000617723 324 ntBASIC5.25□□□□□ -1.57
SNED1Q8TER0 AL138960.2-201ENST00000625145 535 ntBASIC5.25□□□□□ -1.57
SNED1Q8TER0 FP325313.1-201ENST00000638228 703 ntBASIC5.25□□□□□ -1.57
SNED1Q8TER0 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
SNED1Q8TER0 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SNED1Q8TER0 AC000374.1-201ENST00000434698 1745 ntBASIC5.25□□□□□ -1.57
SNED1Q8TER0 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
SNED1Q8TER0 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
SNED1Q8TER0 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
SNED1Q8TER0 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SNED1Q8TER0 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.25□□□□□ -1.57
SNED1Q8TER0 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SNED1Q8TER0 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SNED1Q8TER0 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
SNED1Q8TER0 AL138820.1-201ENST00000617901 5305 ntBASIC5.25□□□□□ -1.57
SNED1Q8TER0 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.25□□□□□ -1.57
SNED1Q8TER0 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
SNED1Q8TER0 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
SNED1Q8TER0 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.24□□□□□ -1.57
SNED1Q8TER0 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SNED1Q8TER0 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SNED1Q8TER0 RNU1-20P-201ENST00000363314 162 ntBASIC5.24□□□□□ -1.57
SNED1Q8TER0 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SNED1Q8TER0 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.24□□□□□ -1.57
SNED1Q8TER0 ZNF736P10Y-201ENST00000403990 1110 ntBASIC5.24□□□□□ -1.57
SNED1Q8TER0 SNORA81-201ENST00000408493 178 ntBASIC5.24□□□□□ -1.57
SNED1Q8TER0 RNU6ATAC-201ENST00000408749 126 ntBASIC5.24□□□□□ -1.57
SNED1Q8TER0 RN7SKP182-201ENST00000410772 298 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms