Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CKS2P33552 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
CKS2P33552 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CKS2P33552 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CKS2P33552 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.91
CKS2P33552 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CKS2P33552 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CKS2P33552 RNA5SP175-201ENST00000364275 119 ntBASIC3.09□□□□□ -1.91
CKS2P33552 MIR3074-201ENST00000384885 81 ntBASIC3.09□□□□□ -1.91
CKS2P33552 SNORA17A-201ENST00000391185 133 ntBASIC3.09□□□□□ -1.91
CKS2P33552 AP000534.2-201ENST00000412729 568 ntBASIC3.09□□□□□ -1.91
CKS2P33552 AC093162.1-201ENST00000419682 124 ntBASIC3.09□□□□□ -1.91
CKS2P33552 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.09□□□□□ -1.91
CKS2P33552 CYP4F29P-201ENST00000420685 446 ntBASIC3.09□□□□□ -1.91
CKS2P33552 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC3.09□□□□□ -1.91
CKS2P33552 RPS29P14-201ENST00000431518 171 ntBASIC3.09□□□□□ -1.91
CKS2P33552 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CKS2P33552 BTG3P1-201ENST00000435859 716 ntBASIC3.09□□□□□ -1.91
CKS2P33552 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC3.09□□□□□ -1.91
CKS2P33552 SUMO2P1-206ENST00000445436 284 ntBASIC3.09□□□□□ -1.91
CKS2P33552 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.09□□□□□ -1.91
CKS2P33552 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CKS2P33552 IFNWP4-201ENST00000453148 294 ntBASIC3.09□□□□□ -1.91
CKS2P33552 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC3.09□□□□□ -1.91
CKS2P33552 YRDCP3-201ENST00000456507 480 ntBASIC3.09□□□□□ -1.91
CKS2P33552 AC104164.2-201ENST00000496953 495 ntBASIC3.09□□□□□ -1.91
CKS2P33552 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.09□□□□□ -1.91
CKS2P33552 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CKS2P33552 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
CKS2P33552 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC3.09□□□□□ -1.91
CKS2P33552 BTF3P13-201ENST00000513224 490 ntBASIC3.09□□□□□ -1.91
CKS2P33552 RNU6-943P-201ENST00000516960 98 ntBASIC3.09□□□□□ -1.91
CKS2P33552 IGKV2-18-201ENST00000522607 343 ntBASIC3.09□□□□□ -1.91
CKS2P33552 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.09□□□□□ -1.91
CKS2P33552 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CKS2P33552 AC024405.1-201ENST00000532521 1042 ntBASIC3.09□□□□□ -1.91
CKS2P33552 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CKS2P33552 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC3.09□□□□□ -1.91
CKS2P33552 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC3.09□□□□□ -1.91
CKS2P33552 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC3.09□□□□□ -1.91
CKS2P33552 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC3.09□□□□□ -1.91
CKS2P33552 AC020978.7-201ENST00000575953 1187 ntBASIC3.09□□□□□ -1.91
CKS2P33552 SNORD39.2-201ENST00000579995 76 ntBASIC3.09□□□□□ -1.91
CKS2P33552 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC3.09□□□□□ -1.91
CKS2P33552 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC3.09□□□□□ -1.91
CKS2P33552 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC3.09□□□□□ -1.91
CKS2P33552 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
CKS2P33552 AC095038.2-201ENST00000621464 1070 ntBASIC3.09□□□□□ -1.91
CKS2P33552 SNORA17.5-201ENST00000630429 132 ntBASIC3.09□□□□□ -1.91
CKS2P33552 AL627171.1-201ENST00000618845 1308 ntBASIC3.09□□□□□ -1.91
CKS2P33552 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.09□□□□□ -1.92
CKS2P33552 CYP1D1P-201ENST00000416662 1433 ntBASIC3.09□□□□□ -1.92
CKS2P33552 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CKS2P33552 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
CKS2P33552 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
CKS2P33552 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
CKS2P33552 AC134882.1-201ENST00000603738 1676 ntBASIC3.08□□□□□ -1.92
CKS2P33552 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CKS2P33552 USP9YP4-201ENST00000424401 1745 ntBASIC3.08□□□□□ -1.92
CKS2P33552 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.08□□□□□ -1.92
CKS2P33552 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CKS2P33552 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CKS2P33552 RNA5SP242-201ENST00000364171 118 ntBASIC3.08□□□□□ -1.92
CKS2P33552 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
CKS2P33552 MIR3065-201ENST00000390137 79 ntBASIC3.08□□□□□ -1.92
CKS2P33552 CXADRP1-201ENST00000398098 1095 ntBASIC3.08□□□□□ -1.92
CKS2P33552 SNRPFP1-201ENST00000414761 252 ntBASIC3.08□□□□□ -1.92
CKS2P33552 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC3.08□□□□□ -1.92
CKS2P33552 BX510359.2-201ENST00000417920 305 ntBASIC3.08□□□□□ -1.92
CKS2P33552 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.08□□□□□ -1.92
CKS2P33552 ATP5HP2-201ENST00000433885 485 ntBASIC3.08□□□□□ -1.92
CKS2P33552 RPL12P46-201ENST00000436610 195 ntBASIC3.08□□□□□ -1.92
CKS2P33552 PSMD10P3-201ENST00000437000 448 ntBASIC3.08□□□□□ -1.92
CKS2P33552 VN1R25P-201ENST00000443385 738 ntBASIC3.08□□□□□ -1.92
CKS2P33552 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC3.08□□□□□ -1.92
CKS2P33552 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.08□□□□□ -1.92
CKS2P33552 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.08□□□□□ -1.92
CKS2P33552 CASP3P1-201ENST00000446037 609 ntBASIC3.08□□□□□ -1.92
CKS2P33552 VN1R40P-201ENST00000455196 941 ntBASIC3.08□□□□□ -1.92
CKS2P33552 AC037198.2-201ENST00000478845 733 ntBASIC3.08□□□□□ -1.92
CKS2P33552 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CKS2P33552 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CKS2P33552 RPL23AP72-201ENST00000492447 435 ntBASIC3.08□□□□□ -1.92
CKS2P33552 HIGD1AP14-201ENST00000507617 282 ntBASIC3.08□□□□□ -1.92
CKS2P33552 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC3.08□□□□□ -1.92
CKS2P33552 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.08□□□□□ -1.92
CKS2P33552 OR5BC1P-201ENST00000529327 739 ntBASIC3.08□□□□□ -1.92
CKS2P33552 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.08□□□□□ -1.92
CKS2P33552 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC3.08□□□□□ -1.92
CKS2P33552 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC3.08□□□□□ -1.92
CKS2P33552 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.08□□□□□ -1.92
CKS2P33552 AL109766.1-201ENST00000555080 552 ntBASIC3.08□□□□□ -1.92
CKS2P33552 AL121839.1-201ENST00000556233 1185 ntBASIC3.08□□□□□ -1.92
CKS2P33552 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.08□□□□□ -1.92
CKS2P33552 AC015911.5-201ENST00000587076 451 ntBASIC3.08□□□□□ -1.92
CKS2P33552 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
CKS2P33552 AC087763.1-201ENST00000603391 286 ntBASIC3.08□□□□□ -1.92
CKS2P33552 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.08□□□□□ -1.92
CKS2P33552 AP000255.1-201ENST00000610276 676 ntBASIC3.08□□□□□ -1.92
CKS2P33552 AL021997.2-201ENST00000615674 271 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms