Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AC140113.4-201ENST00000622087 222 ntBASIC4.03□□□□□ -1.76
SGCEO43556 AC005086.4-201ENST00000623065 213 ntBASIC4.03□□□□□ -1.76
SGCEO43556 AC067852.7-201ENST00000623270 535 ntBASIC4.03□□□□□ -1.76
SGCEO43556 MIR6715B-201ENST00000637172 77 ntBASIC4.03□□□□□ -1.76
SGCEO43556 AL356489.2-201ENST00000566968 3528 ntBASIC4.03□□□□□ -1.76
SGCEO43556 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
SGCEO43556 CYP1D1P-201ENST00000416662 1433 ntBASIC4.03□□□□□ -1.76
SGCEO43556 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.03□□□□□ -1.76
SGCEO43556 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.03□□□□□ -1.76
SGCEO43556 AC016588.2-201ENST00000632484 3021 ntBASIC4.03□□□□□ -1.77
SGCEO43556 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.02□□□□□ -1.77
SGCEO43556 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SGCEO43556 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
SGCEO43556 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SGCEO43556 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
SGCEO43556 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
SGCEO43556 AL049555.1-201ENST00000562834 1933 ntBASIC4.02□□□□□ -1.77
SGCEO43556 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SGCEO43556 RHOT1P2-201ENST00000366423 333 ntBASIC4.02□□□□□ -1.77
SGCEO43556 RNA5SP87-201ENST00000384155 118 ntBASIC4.02□□□□□ -1.77
SGCEO43556 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SGCEO43556 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SGCEO43556 VDAC1P9-201ENST00000412766 841 ntBASIC4.02□□□□□ -1.77
SGCEO43556 AC007394.1-201ENST00000421941 531 ntBASIC4.02□□□□□ -1.77
SGCEO43556 AL391219.1-201ENST00000422570 483 ntBASIC4.02□□□□□ -1.77
SGCEO43556 AL590762.4-201ENST00000425885 253 ntBASIC4.02□□□□□ -1.77
SGCEO43556 NANOGP6-201ENST00000429190 847 ntBASIC4.02□□□□□ -1.77
SGCEO43556 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.02□□□□□ -1.77
SGCEO43556 OR7H2P-201ENST00000513483 306 ntBASIC4.02□□□□□ -1.77
SGCEO43556 IGKV1-32-201ENST00000519290 311 ntBASIC4.02□□□□□ -1.77
SGCEO43556 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.02□□□□□ -1.77
SGCEO43556 EIF4EP5-201ENST00000528228 640 ntBASIC4.02□□□□□ -1.77
SGCEO43556 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SGCEO43556 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.02□□□□□ -1.77
SGCEO43556 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
SGCEO43556 AC068714.1-201ENST00000559623 800 ntBASIC4.02□□□□□ -1.77
SGCEO43556 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.02□□□□□ -1.77
SGCEO43556 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.02□□□□□ -1.77
SGCEO43556 ATP5J2P6-201ENST00000565203 266 ntBASIC4.02□□□□□ -1.77
SGCEO43556 HNRNPCP4-201ENST00000571636 900 ntBASIC4.02□□□□□ -1.77
SGCEO43556 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.02□□□□□ -1.77
SGCEO43556 AC209154.1-201ENST00000582156 337 ntBASIC4.02□□□□□ -1.77
SGCEO43556 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.02□□□□□ -1.77
SGCEO43556 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.02□□□□□ -1.77
SGCEO43556 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.02□□□□□ -1.77
SGCEO43556 AC010200.2-201ENST00000605098 235 ntBASIC4.02□□□□□ -1.77
SGCEO43556 FAM25E-202ENST00000608562 189 ntBASIC4.02□□□□□ -1.77
SGCEO43556 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SGCEO43556 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SGCEO43556 Z73965.1-201ENST00000623412 2297 ntBASIC4.02□□□□□ -1.77
SGCEO43556 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.02□□□□□ -1.77
SGCEO43556 AC010928.1-201ENST00000592477 1447 ntBASIC4.02□□□□□ -1.77
SGCEO43556 HSPD1P14-201ENST00000432666 1618 ntBASIC4.02□□□□□ -1.77
SGCEO43556 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.01□□□□□ -1.77
SGCEO43556 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.01□□□□□ -1.77
SGCEO43556 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
SGCEO43556 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SGCEO43556 AL034403.1-201ENST00000399414 885 ntBASIC4.01□□□□□ -1.77
SGCEO43556 FCF1P5-201ENST00000406490 482 ntBASIC4.01□□□□□ -1.77
SGCEO43556 RNA5SP39-201ENST00000411245 120 ntBASIC4.01□□□□□ -1.77
SGCEO43556 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.01□□□□□ -1.77
SGCEO43556 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.01□□□□□ -1.77
SGCEO43556 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.01□□□□□ -1.77
SGCEO43556 AC011753.3-201ENST00000443436 406 ntBASIC4.01□□□□□ -1.77
SGCEO43556 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.01□□□□□ -1.77
SGCEO43556 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.01□□□□□ -1.77
SGCEO43556 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.01□□□□□ -1.77
SGCEO43556 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.01□□□□□ -1.77
SGCEO43556 RPL23AP65-201ENST00000475608 468 ntBASIC4.01□□□□□ -1.77
SGCEO43556 AC108022.1-201ENST00000493466 478 ntBASIC4.01□□□□□ -1.77
SGCEO43556 AK4P6-201ENST00000505168 528 ntBASIC4.01□□□□□ -1.77
SGCEO43556 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.01□□□□□ -1.77
SGCEO43556 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.01□□□□□ -1.77
SGCEO43556 AC113398.2-201ENST00000507630 558 ntBASIC4.01□□□□□ -1.77
SGCEO43556 AC007016.1-201ENST00000512110 244 ntBASIC4.01□□□□□ -1.77
SGCEO43556 CYCSP28-201ENST00000534284 321 ntBASIC4.01□□□□□ -1.77
SGCEO43556 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.01□□□□□ -1.77
SGCEO43556 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.01□□□□□ -1.77
SGCEO43556 AC008147.3-201ENST00000548666 354 ntBASIC4.01□□□□□ -1.77
SGCEO43556 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.01□□□□□ -1.77
SGCEO43556 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.01□□□□□ -1.77
SGCEO43556 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.01□□□□□ -1.77
SGCEO43556 ADAD1P2-201ENST00000588476 646 ntBASIC4.01□□□□□ -1.77
SGCEO43556 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.01□□□□□ -1.77
SGCEO43556 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.01□□□□□ -1.77
SGCEO43556 AL133338.2-201ENST00000604292 736 ntBASIC4.01□□□□□ -1.77
SGCEO43556 AC090953.1-201ENST00000604305 1092 ntBASIC4.01□□□□□ -1.77
SGCEO43556 AC017076.1-201ENST00000607613 578 ntBASIC4.01□□□□□ -1.77
SGCEO43556 AL049539.1-201ENST00000611964 459 ntBASIC4.01□□□□□ -1.77
SGCEO43556 AC004825.2-201ENST00000616634 455 ntBASIC4.01□□□□□ -1.77
SGCEO43556 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.01□□□□□ -1.77
SGCEO43556 AC004232.3-201ENST00000622977 525 ntBASIC4.01□□□□□ -1.77
SGCEO43556 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.01□□□□□ -1.77
SGCEO43556 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
SGCEO43556 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.01□□□□□ -1.77
SGCEO43556 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.01□□□□□ -1.77
SGCEO43556 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.01□□□□□ -1.77
SGCEO43556 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SGCEO43556 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SGCEO43556 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms