Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 SLC2A13P1-201ENST00000531560 322 ntBASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 RPA2P3-201ENST00000533268 770 ntBASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 OR6C73P-201ENST00000546432 358 ntBASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 NPIPB1P-202ENST00000588786 828 ntBASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 VN1R79P-201ENST00000593540 513 ntBASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 AC099654.10-201ENST00000640395 161 ntBASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 AL031985.3-201ENST00000565390 2449 ntBASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 AC104966.1-201ENST00000467010 1464 ntBASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 CYP1D1P-201ENST00000416662 1433 ntBASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 AC107021.2-201ENST00000567714 2095 ntBASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 AC011504.1-201ENST00000623331 4103 ntBASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 AL731532.1-201ENST00000623972 4236 ntBASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 RNU5E-5P-201ENST00000365379 116 ntBASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 RN7SKP161-201ENST00000411110 305 ntBASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 AC116036.1-201ENST00000412199 367 ntBASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 AC109780.2-201ENST00000413467 845 ntBASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 USP9YP13-201ENST00000417797 480 ntBASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 RPS7P8-201ENST00000418311 581 ntBASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 AC233728.2-201ENST00000425348 757 ntBASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 AC130360.1-201ENST00000425489 1117 ntBASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 AC005033.1-201ENST00000428904 813 ntBASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 AC007679.3-201ENST00000434035 414 ntBASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 MTCO3P18-201ENST00000440206 761 ntBASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 MTND3P10-201ENST00000450967 341 ntBASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 AL033528.1-201ENST00000453780 140 ntBASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 PPIAP7-201ENST00000454070 489 ntBASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 LARP1BP2-201ENST00000486594 519 ntBASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 AC091133.4-201ENST00000511142 308 ntBASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 PAICSP4-201ENST00000517543 1253 ntBASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 AC130365.2-201ENST00000525882 1201 ntBASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 AP000620.1-201ENST00000527147 504 ntBASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 OR6M2P-201ENST00000529831 871 ntBASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 AP004247.1-201ENST00000531556 1289 ntBASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 AC004217.3-201ENST00000551552 878 ntBASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 UBE2FP2-201ENST00000566646 462 ntBASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 MIR3189-201ENST00000578735 73 ntBASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 MIR4701-201ENST00000583094 63 ntBASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 AC006504.3-201ENST00000586818 523 ntBASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 MIR3688-2-201ENST00000636963 87 ntBASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 AC116667.2-201ENST00000641075 823 ntBASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 IFIT1P1-201ENST00000400497 1449 ntBASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 CAP1P2-201ENST00000417455 1409 ntBASIC5.8□□□□□ -1.48
PTCHD1Q96NR3 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms