Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC090638.1-201ENST00000498296 909 ntBASIC5.29□□□□□ -1.56
RNF220Q5VTB9 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RNF220Q5VTB9 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RNF220Q5VTB9 AC109445.1-201ENST00000512356 383 ntBASIC5.29□□□□□ -1.56
RNF220Q5VTB9 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5.29□□□□□ -1.56
RNF220Q5VTB9 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.29□□□□□ -1.56
RNF220Q5VTB9 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.29□□□□□ -1.56
RNF220Q5VTB9 SMARCE1P4-201ENST00000523647 241 ntBASIC5.29□□□□□ -1.56
RNF220Q5VTB9 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.29□□□□□ -1.56
RNF220Q5VTB9 HMGN2P36-201ENST00000529541 409 ntBASIC5.29□□□□□ -1.56
RNF220Q5VTB9 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
RNF220Q5VTB9 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC5.29□□□□□ -1.56
RNF220Q5VTB9 PCNAP4-201ENST00000532690 730 ntBASIC5.29□□□□□ -1.56
RNF220Q5VTB9 EMP1-206ENST00000537612 505 ntTSL 3 BASIC5.29□□□□□ -1.56
RNF220Q5VTB9 OSBPL9P5-201ENST00000542581 171 ntBASIC5.29□□□□□ -1.56
RNF220Q5VTB9 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.29□□□□□ -1.56
RNF220Q5VTB9 AC079171.1-201ENST00000568788 914 ntBASIC5.29□□□□□ -1.56
RNF220Q5VTB9 MTCYBP13-201ENST00000578634 1093 ntBASIC5.29□□□□□ -1.56
RNF220Q5VTB9 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.29□□□□□ -1.56
RNF220Q5VTB9 AC008687.2-201ENST00000597865 520 ntBASIC5.29□□□□□ -1.56
RNF220Q5VTB9 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.29□□□□□ -1.56
RNF220Q5VTB9 AL353778.1-201ENST00000603149 408 ntBASIC5.29□□□□□ -1.56
RNF220Q5VTB9 AC096553.1-201ENST00000605169 829 ntBASIC5.29□□□□□ -1.56
RNF220Q5VTB9 AC090246.1-201ENST00000616499 426 ntBASIC5.29□□□□□ -1.56
RNF220Q5VTB9 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
RNF220Q5VTB9 AC131159.1-201ENST00000621854 213 ntBASIC5.29□□□□□ -1.56
RNF220Q5VTB9 AC078883.4-201ENST00000623218 367 ntBASIC5.29□□□□□ -1.56
RNF220Q5VTB9 AL683826.1-201ENST00000624104 627 ntBASIC5.29□□□□□ -1.56
RNF220Q5VTB9 AL512506.2-201ENST00000624472 458 ntBASIC5.29□□□□□ -1.56
RNF220Q5VTB9 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.29□□□□□ -1.56
RNF220Q5VTB9 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.29□□□□□ -1.56
RNF220Q5VTB9 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.29□□□□□ -1.56
RNF220Q5VTB9 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.29□□□□□ -1.56
RNF220Q5VTB9 YES1P1-201ENST00000418510 1628 ntBASIC5.29□□□□□ -1.56
RNF220Q5VTB9 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNF220Q5VTB9 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
RNF220Q5VTB9 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.29□□□□□ -1.56
RNF220Q5VTB9 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNF220Q5VTB9 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.29□□□□□ -1.56
RNF220Q5VTB9 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.29□□□□□ -1.56
RNF220Q5VTB9 AC079097.1-201ENST00000512187 1399 ntBASIC5.29□□□□□ -1.56
RNF220Q5VTB9 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RNF220Q5VTB9 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
RNF220Q5VTB9 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNF220Q5VTB9 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNF220Q5VTB9 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RNF220Q5VTB9 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.28□□□□□ -1.56
RNF220Q5VTB9 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.28□□□□□ -1.56
RNF220Q5VTB9 AC109315.1-201ENST00000584143 1347 ntBASIC5.28□□□□□ -1.56
RNF220Q5VTB9 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.28□□□□□ -1.56
RNF220Q5VTB9 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNF220Q5VTB9 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.28□□□□□ -1.56
RNF220Q5VTB9 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RNF220Q5VTB9 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNF220Q5VTB9 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
RNF220Q5VTB9 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
RNF220Q5VTB9 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
RNF220Q5VTB9 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
RNF220Q5VTB9 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.28□□□□□ -1.56
RNF220Q5VTB9 AL359643.1-201ENST00000404109 423 ntBASIC5.28□□□□□ -1.56
RNF220Q5VTB9 HNRNPDP2-201ENST00000406475 478 ntBASIC5.28□□□□□ -1.56
RNF220Q5VTB9 MIR1271-201ENST00000408537 86 ntBASIC5.28□□□□□ -1.56
RNF220Q5VTB9 AP000534.2-201ENST00000412729 568 ntBASIC5.28□□□□□ -1.56
RNF220Q5VTB9 MTND4P22-201ENST00000413116 1169 ntBASIC5.28□□□□□ -1.56
RNF220Q5VTB9 AL161449.1-201ENST00000414531 1199 ntBASIC5.28□□□□□ -1.56
RNF220Q5VTB9 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.28□□□□□ -1.56
RNF220Q5VTB9 RNF10P1-201ENST00000418589 369 ntBASIC5.28□□□□□ -1.56
RNF220Q5VTB9 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC5.28□□□□□ -1.56
RNF220Q5VTB9 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.28□□□□□ -1.56
RNF220Q5VTB9 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.28□□□□□ -1.56
RNF220Q5VTB9 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.28□□□□□ -1.56
RNF220Q5VTB9 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.28□□□□□ -1.56
RNF220Q5VTB9 AL353597.2-202ENST00000434901 373 ntBASIC5.28□□□□□ -1.56
RNF220Q5VTB9 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.28□□□□□ -1.56
RNF220Q5VTB9 MTND3P1-201ENST00000441336 220 ntBASIC5.28□□□□□ -1.56
RNF220Q5VTB9 AC104339.1-201ENST00000465478 348 ntBASIC5.28□□□□□ -1.56
RNF220Q5VTB9 RPS17P15-201ENST00000475609 349 ntBASIC5.28□□□□□ -1.56
RNF220Q5VTB9 RN7SL273P-201ENST00000481561 299 ntBASIC5.28□□□□□ -1.56
RNF220Q5VTB9 RN7SL570P-201ENST00000484405 292 ntBASIC5.28□□□□□ -1.56
RNF220Q5VTB9 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC5.28□□□□□ -1.56
RNF220Q5VTB9 AC073358.1-201ENST00000505671 684 ntBASIC5.28□□□□□ -1.56
RNF220Q5VTB9 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.28□□□□□ -1.56
RNF220Q5VTB9 AC079395.1-201ENST00000510981 262 ntBASIC5.28□□□□□ -1.56
RNF220Q5VTB9 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC5.28□□□□□ -1.56
RNF220Q5VTB9 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.28□□□□□ -1.56
RNF220Q5VTB9 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.28□□□□□ -1.56
RNF220Q5VTB9 AP001189.2-201ENST00000527320 189 ntBASIC5.28□□□□□ -1.56
RNF220Q5VTB9 MTND2P26-201ENST00000528255 1029 ntBASIC5.28□□□□□ -1.56
RNF220Q5VTB9 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.28□□□□□ -1.56
RNF220Q5VTB9 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.28□□□□□ -1.56
RNF220Q5VTB9 AC006512.2-201ENST00000543250 486 ntBASIC5.28□□□□□ -1.56
RNF220Q5VTB9 DUXAP1-201ENST00000556632 463 ntBASIC5.28□□□□□ -1.56
RNF220Q5VTB9 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.28□□□□□ -1.56
RNF220Q5VTB9 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
RNF220Q5VTB9 AC009220.3-201ENST00000604318 586 ntBASIC5.28□□□□□ -1.56
RNF220Q5VTB9 AC015871.5-202ENST00000623252 701 ntBASIC5.28□□□□□ -1.56
RNF220Q5VTB9 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.28□□□□□ -1.56
RNF220Q5VTB9 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.28□□□□□ -1.56
RNF220Q5VTB9 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
RNF220Q5VTB9 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms