Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.83□□□□□ -1.64
TPM4P67936 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.83□□□□□ -1.64
TPM4P67936 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.83□□□□□ -1.64
TPM4P67936 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.83□□□□□ -1.64
TPM4P67936 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.83□□□□□ -1.64
TPM4P67936 HMGB1P16-201ENST00000447155 540 ntBASIC4.83□□□□□ -1.64
TPM4P67936 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.83□□□□□ -1.64
TPM4P67936 RPL23AP71-201ENST00000470966 469 ntBASIC4.83□□□□□ -1.64
TPM4P67936 AC105918.1-201ENST00000474399 838 ntBASIC4.83□□□□□ -1.64
TPM4P67936 AC006517.1-201ENST00000480485 328 ntBASIC4.83□□□□□ -1.64
TPM4P67936 RN7SL205P-201ENST00000490174 284 ntBASIC4.83□□□□□ -1.64
TPM4P67936 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.83□□□□□ -1.64
TPM4P67936 ATP1B1P1-201ENST00000509767 915 ntBASIC4.83□□□□□ -1.64
TPM4P67936 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.83□□□□□ -1.64
TPM4P67936 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.83□□□□□ -1.64
TPM4P67936 AP006289.1-201ENST00000538089 277 ntBASIC4.83□□□□□ -1.64
TPM4P67936 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
TPM4P67936 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.83□□□□□ -1.64
TPM4P67936 AC020914.4-201ENST00000597690 277 ntBASIC4.83□□□□□ -1.64
TPM4P67936 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.83□□□□□ -1.64
TPM4P67936 AC138907.10-201ENST00000623708 983 ntBASIC4.83□□□□□ -1.64
TPM4P67936 AC008785.1-201ENST00000624475 456 ntBASIC4.83□□□□□ -1.64
TPM4P67936 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.83□□□□□ -1.64
TPM4P67936 FP325313.1-201ENST00000638228 703 ntBASIC4.83□□□□□ -1.64
TPM4P67936 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TPM4P67936 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TPM4P67936 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.83□□□□□ -1.64
TPM4P67936 LINC02471-203ENST00000641941 4752 ntBASIC4.82□□□□□ -1.64
TPM4P67936 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TPM4P67936 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
TPM4P67936 AC083899.2-201ENST00000423285 1376 ntBASIC4.82□□□□□ -1.64
TPM4P67936 AC017007.4-201ENST00000503353 1352 ntBASIC4.82□□□□□ -1.64
TPM4P67936 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
TPM4P67936 NCSTNP1-201ENST00000406229 144 ntBASIC4.82□□□□□ -1.64
TPM4P67936 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC4.82□□□□□ -1.64
TPM4P67936 AP001324.1-201ENST00000428553 399 ntBASIC4.82□□□□□ -1.64
TPM4P67936 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.82□□□□□ -1.64
TPM4P67936 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.82□□□□□ -1.64
TPM4P67936 CEACAMP1-201ENST00000434624 1035 ntBASIC4.82□□□□□ -1.64
TPM4P67936 RPL7P28-201ENST00000437739 740 ntBASIC4.82□□□□□ -1.64
TPM4P67936 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.82□□□□□ -1.64
TPM4P67936 PA2G4P6-201ENST00000438325 1197 ntBASIC4.82□□□□□ -1.64
TPM4P67936 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.82□□□□□ -1.64
TPM4P67936 AC026348.1-201ENST00000462549 1053 ntBASIC4.82□□□□□ -1.64
TPM4P67936 AL592156.1-201ENST00000508758 304 ntBASIC4.82□□□□□ -1.64
TPM4P67936 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.82□□□□□ -1.64
TPM4P67936 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.82□□□□□ -1.64
TPM4P67936 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.82□□□□□ -1.64
TPM4P67936 RNA5SP34-201ENST00000516887 130 ntBASIC4.82□□□□□ -1.64
TPM4P67936 HMGN2P6-201ENST00000551091 273 ntBASIC4.82□□□□□ -1.64
TPM4P67936 AC090888.3-201ENST00000558917 509 ntBASIC4.82□□□□□ -1.64
TPM4P67936 MIR4489-201ENST00000578869 62 ntBASIC4.82□□□□□ -1.64
TPM4P67936 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.82□□□□□ -1.64
TPM4P67936 AC022467.1-201ENST00000614738 749 ntBASIC4.82□□□□□ -1.64
TPM4P67936 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.82□□□□□ -1.64
TPM4P67936 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
TPM4P67936 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.81□□□□□ -1.64
TPM4P67936 MAPK10-253ENST00000641010 4072 ntBASIC4.81□□□□□ -1.64
TPM4P67936 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TPM4P67936 AC010132.2-201ENST00000295493 1043 ntBASIC4.81□□□□□ -1.64
TPM4P67936 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.81□□□□□ -1.64
TPM4P67936 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
TPM4P67936 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
TPM4P67936 RNA5SP435-201ENST00000364044 108 ntBASIC4.81□□□□□ -1.64
TPM4P67936 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.81□□□□□ -1.64
TPM4P67936 MIR298-201ENST00000401212 88 ntBASIC4.81□□□□□ -1.64
TPM4P67936 VN1R31P-201ENST00000417498 730 ntBASIC4.81□□□□□ -1.64
TPM4P67936 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.81□□□□□ -1.64
TPM4P67936 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.81□□□□□ -1.64
TPM4P67936 AC234779.1-201ENST00000425910 285 ntBASIC4.81□□□□□ -1.64
TPM4P67936 RPL23AP89-201ENST00000439324 255 ntBASIC4.81□□□□□ -1.64
TPM4P67936 AC243772.1-201ENST00000451620 410 ntBASIC4.81□□□□□ -1.64
TPM4P67936 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.81□□□□□ -1.64
TPM4P67936 IGLV2-28-201ENST00000520681 304 ntBASIC4.81□□□□□ -1.64
TPM4P67936 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.81□□□□□ -1.64
TPM4P67936 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.81□□□□□ -1.64
TPM4P67936 AL031320.1-201ENST00000604177 357 ntBASIC4.81□□□□□ -1.64
TPM4P67936 AC012603.1-201ENST00000606424 528 ntBASIC4.81□□□□□ -1.64
TPM4P67936 AC078899.5-201ENST00000612475 178 ntBASIC4.81□□□□□ -1.64
TPM4P67936 AL133243.1-201ENST00000614487 366 ntBASIC4.81□□□□□ -1.64
TPM4P67936 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.81□□□□□ -1.64
TPM4P67936 CASC19-222ENST00000641321 1173 ntBASIC4.81□□□□□ -1.64
TPM4P67936 ASNSP1-201ENST00000518311 1939 ntBASIC4.81□□□□□ -1.64
TPM4P67936 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TPM4P67936 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
TPM4P67936 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TPM4P67936 AC090971.4-201ENST00000560291 1800 ntBASIC4.81□□□□□ -1.64
TPM4P67936 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.81□□□□□ -1.64
TPM4P67936 AC027287.1-201ENST00000553115 1453 ntBASIC4.81□□□□□ -1.64
TPM4P67936 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
TPM4P67936 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TPM4P67936 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.8□□□□□ -1.64
TPM4P67936 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
TPM4P67936 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TPM4P67936 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
TPM4P67936 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TPM4P67936 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TPM4P67936 MIR3065-201ENST00000390137 79 ntBASIC4.8□□□□□ -1.64
TPM4P67936 SNORA81-201ENST00000408493 178 ntBASIC4.8□□□□□ -1.64
TPM4P67936 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms